| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g10171 | UNCHARACTERIZED | chr_5 | 3366387 | 3373855 | - |
| CDS | |||||
| alvinactis_v1_g10171 | |||||
| Transcript |
| alvinactis_v1_g10171 |
| Protein |
| alvinactis_v1_g10171 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR051657 | Family | RNF168/RNF169 E3 ubiquitin-protein ligase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23328 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006302 | Biological Process | double-strand break repair | Interproscan |
| GO:0031491 | Molecular Function | nucleosome binding | Interproscan |
| GO:0035861 | Cellular Component | site of double-strand break | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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