| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| XP_032903673.1 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN | NC_045957.1 | 62696505 | 62720509 | + |
| CDS | |||||
| XP_032903673.1 | |||||
| Transcript |
| - |
| Protein |
| XP_032903673.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF11627 | HnRNPA1_LC | Heterogeneous nuclear ribonucleoprotein A1, LC domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR021662 | Domain | Heterogeneous nuclear ribonucleoprotein A1/A2, C-terminal | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48026 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003730 | Molecular Function | mRNA 3'-UTR binding | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
