Detailed information of XP_032902759.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032902759.1METHYL-CPG BINDING PROTEIN, MBDNC_045984.12264667922671185-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMBD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01429MBDMethyl-CpG binding domainDomainInterproscan
PF14048MBD_CC-terminal domain of methyl-CpG binding protein 2 and 3FamilyInterproscan
PF16564MBDap55-binding region of Methyl-CpG-binding domain proteins MBDDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001739DomainMethyl-CpG DNA bindingInterproscan
IPR016177Homologous_superfamilyDNA-binding domain superfamilyInterproscan
IPR025884DomainMethyl-CpG binding protein 2/3, C-terminal domainInterproscan
IPR032343DomainMethyl-CpG-binding domain protein 2/3, p55-binding regionInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12396METHYL-CPG BINDING PROTEIN, MBDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006346Biological ProcessDNA methylation-dependent constitutive heterochromatin formationInterproscan
GO:0008327Molecular Functionmethyl-CpG bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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