Detailed information of XP_032900295.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032900295.1INTEGRIN BETA SUBUNITNC_045981.12011154420194179+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF07965Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF18372I-EGF_1Integrin beta epidermal growth factor like domain 1DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR040622DomainIntegrin beta, epidermal growth factor-like domain 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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