Gene detail

Detailed information of XP_032899002.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032899002.1	SERINE-THREONINE PROTEIN KINASE	NC_045980.1	5037261	5430641	-

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032899002.1

ATGGATGAAGATAATAAGACAAAGAGCGAAAAGCAGCATCTAACTGTCCAAAAAGCATTGCAGCAATGTGAATTGGTCCAAAATATGATAGAAATCAGCATCTCCAGTCTGGAAGGGTTAAGGACTAAATGTGCCACAGCAAATGACCTAACGCAAAAAGAAATAAGAACACTGGAGGGTAAACTTGTGAAGTACTTCAGCCGTCAGCTTTCCTGTAAACGTAATGTTTCTCTGCAAGAACGGAGTGCTGAGTTAGAGGGATTTCCCCACCTCGTTCATTGGTTTCGGATTGTAAATATTCGCAAGGAAGTGATAGAGGACATTGCCCCTGATCAACTGACTCTAGAAGCACTTTTGGAGATGACTGATGAAGACGTGTGTGAAACAGTGAAGAAATATGGGACAAACAGTGAGGAATGTGCCAGATTAATTGCTTCATTGTCCTGTCTACGAAGTGTTTATAAATCAGGGAGTGGCCATTCCAGCCAAGACTGGGTCATCCAATGGCCTACAACAGAAACTGGGAAAGAGAATACTCCTGTCAGCCAAGCGGAACCAGTCATGTGGCCTGGATGCAGCATCACACTAAGCCCCAAGATGCCATCAAAGTTCATGCAGCAAGACTTCCATTCAGTGCCTGTGCTAGGAACCAATTGTACTTACACAGATAGACTGACCATTGGAGATCCGATTGGGCTTTATCCTACATTTGAGAGTGGGCCAAGTTCACTGCCACCATCTCCACGGCAGCGTCATCCAATTCATACCCCCCCTCGGACTCCTCCTATAGTAAAAACAATGACACCTCCGGGAACACCACCTGTGAGGAGGAGGAACAAACTGAAACCACCTGGAACTCCTCCACCAACGTCTCGCAAATTGATTCACCTCATTCCTGGCTTCACTGCACTACACCGAAGTAAATCACATGAGTTCCAGCTAGGAAACAGGGTGGAAGAAACGCATACTCCAAAAGCAAAGAAAAAGAACAAGCCTCTAAATCTGAAGATACATAATAGTGTTGGCAGCTGTGAGAACATCCCAGCTCAACGTTCTCCTCTTCTCTCAGAACGTTCTTTGCGCTCCTTTTTTGTTGGACATCCATCTTTTCTTCCTTCCACACCTCCAGTTCACACTGATGCCAATTTCTCATCAAATACATTGTCAGTGCCTCGATGGTCCCCACAGATTCCCCGCAGAGATCTTGGGAATTCAATAAAACACAGATTTTCCACGAAGTATTGGATGTCTCAGACCTGCACAGTATGTGGGAAAGGGATGCTTTTTGGCTTGAAATGCAAAAACTGCAAGTTGAAGTGCCATAACAAATGCACCAAAGAAGCTCCACCTTGTCATTTACTAATTATTCATCGTGGAGCAAGACTTGTGCGAACAGAATCTGTGCCATGTGACATTAACAATCCTCTTAAGAAGCCACCCAGGTACTCCGATCTGCACTCCAGCCAAACACTGCCAAAAACCAACAAAATTAATAAGGATCATATACCGGCCCCTTACCAGCCGGATTCAAGCAGTAATCCTTCATCAACAACATCTTCAACTCCATCATCTCCTGCACCACCTCTCCCTCCCAGTGCAACACCACCTTCACCTCTTCATCCGTCACCACAGTGCATTCGCCAACAGAAACCGTTCAACCTGTCAGGTACAACTCTTCATTATTCTGTTTCTGCCTTTTCTCTGTTGCAAGCTTCTCATTATTACAAGTACAAGCAGCAGTTCATTTTTCCAGACGTCACACCTGAGACACAAAATCGAACTCCACAAGTTGTCCTTCATCCTGTCAACTCTGATCCCACTGGAGGAAACCCAACACTTCGAGTGGAAGTGAATGAGCCCACTTCAGAGAATGAAGATGCAAATGATGCTTCTAAGTCAGATGGTTCGGAAGATGACTTTGAGGAAATGAATCTATCATTATTGTCTGCACGGAATTTTCCACGGAAAGCAAGTCAGACCAGCATTTTCCTCCAGGAATGGGATATCCCATTTGAGCAGCTGGAAATTGGAGAACTCATAGGCAAAGGACGCTTTGGCAAAGTCTACCATGGTCGTTGGCATGGAGAGGTAGCAATCCGTTTGATTGATATTGAAAGAGACAATGAGGACCATCTAAAACTTTTCAAAAGGAAAGTAATGGCATATAGACAAACCCGACATGAGAACGTGGTGCTGTTTATGGGAGCCTGTATGAGTCCCCCTCATTTAGCTATTATCACCAGCCTCTGCAAAGGAAGAACTCTTTACTCTGTTGTAAGAGATGCTAAAATGGTGTTGGATGTGAACAAGACCAGACAAATTGCTCAGGAGATTGTAAAGGGTATGGGTTACCTACATGCTAAAGGAATTCTTCATAAAGATTTGAAATCAAAGAATATATTTTACGACAATGGAAAGATAATCATTACCGATTTTGGACTCTTCAGCATCTCTGGAGCTTTGCAAGAGGGCAGGAGAGAGAGTGAAATGAGGATCCCTAATGGTTGGCTGTATCATCTGGCTCCTGAAATTATTCAACAACTCTCTCCATCAACAGATGAAGATAAACTCCCGTTCTCCAAGCAATCTGATGTTTTTGCATTTGGAACCGTATGGTTTGAGTTGCATGCACGTGAGTGGCCTTTCAAGAATCAGCCCTCAGATGCGATAATATGGCAAGCCGGGCGAGGAATGAAGCCGAATCTAAGTCAAATTGGTGTAGGAAAGGAGATTGTGGATATCTTGCTTTTCTGCTGGGCCTATGAGCAGGAGGAACGCCCTAGTTTCTCGAAGATCATGGAGCTGCTAGAGAAATTACCCAAGAGAAACCGCCGGCTCTCTCACCCTGGACATTTCTGGAAGTCAGCTGAGTATGTTTCCCTTAGTTCCAATGTGTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13543	SAM_KSR1	SAM like domain present in kinase suppressor RAS 1	Domain	Interproscan
PF20406	SAM_KSR1_N	Kinase suppressor RAS 1 N-terminal helical hairpin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR025561	Domain	Kinase suppressor of RAS, SAM-like domain	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR046861	Domain	Kinase suppressor RAS 1, N-terminal helical hairpin	Interproscan
IPR046933	Homologous_superfamily	Kinase suppressor RAS 1, N-terminal helical hairpin superfamily	Interproscan
IPR050167	Family	Serine/threonine-protein kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0007265	Biological Process	Ras protein signal transduction	Interproscan
GO:0019722	Biological Process	calcium-mediated signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-