Detailed information of XP_032898303.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032898303.1MAKORIN-RELATEDNC_045979.11073583910765738+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12861zf-ANAPC11Anaphase-promoting complex subunit 11 RING-H2 fingerFamilyInterproscan
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF18044zf-CCCH_4CCCH-type zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR024991DomainAnaphase-promoting complex subunit 11, RING-H2 fingerInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR041367DomainE3 ligase, CCCH-type zinc fingerInterproscan
IPR045072FamilyMKRN-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11224MAKORIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005680Cellular Componentanaphase-promoting complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031145Biological Processanaphase-promoting complex-dependent catabolic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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