Gene detail

Detailed information of XP_032895148.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032895148.1	HYALURONAN RECEPTOR	NC_045975.1	34938537	34967535	-

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032895148.1

ATGTTGCACAGGCTGTTTATTGGAGCTTTGGGTTCACTGCTGGTGGCAAATTCCTCCTGTGATCAAGATGTGGAGACAGGTTGCGGGACCCAAGGAATCATTCAGAAGGAGTTTGGTGGTCGCTACCAGCTGGACTTTCAGGCCGCGGCAGACTTGTGCCAGTCCCTCGGGACCACCTTGGCCACACTGGACCAATTGAAGAGGGCGCACGCAGAAGGCTATGAAACCTGCAGGTATGGCTGGATCGAAGGCGGTCTGATTGCTCTCCCTCGCATACAAGCTCACCCCTCATGTGGAAAAAAATTCACCGGCATCTACACAGTTCAAAGGCCGCAGGAGATGAAGTACGATGTGTTCTGCTTCAGAGAAACAGATGACAGAATCTGTTCCACTTCCATGACTCCACCCCACCCCAGCCTGAGCCGCAACTACGACCTTCCAACCCCCTCATGGATGGCCATGGGTGTACATGACTCCACAGAATTAACAGTGGATCCGTCAACAGAGGACGTTGGATTCTCTACTGACACCTCAACGGAAGCAGAGAGACTACCATCGTCGCTTGTACCTAGACTTGTGGAGCAAAGGTCTCAGAGTTCAGCACAGAGGCAGCCCCAATCAACCCGAGAGCTCTCGCCGCTTGTGGTATTAACAGAATTGTTCCTCTCTGGCGAACAGCCCTTCAGAGCGGCGCCCACTGTAACTCTGGGCTCCAACGCAGAGGTGAGCGCATCTCCCACAAGGACAGGATCTGTGTTGAACAACTACCCTGGATCACCAGGTCTGCAGAGGAATACCAATGAGGCTATGGATGGCTCGGGATCTGCAGGGGGCAGAGAATCGTACACCGAGTCAACAAGGCCAATTCCATTGAGGTCGGAAGACCACGACCCAGACCATCCCACAGAATATTCCGCAGAGTTCCCCAGCAGTGGGAGCAACTCAGTTAGTTTCCCTTCAACTCTGTTTTTGTACAACGACCCGCTAGTGAATAGCGCATCAGGAGAAGAACTACAAGTCCACCCCATGGGAGAGGTTCCGCTGACGATAGACATCCATGGTGCAAAATCAATAGGAAATGTGGGCATTACAACCATCAGGAGCACCCCTTCCCCTTTCCGTCTCACTTCAGACGGCAGCCTAATATTTAATGCAATGGAAGTAAGGGAGCCACACTCTGAGCCGCATGAATCGAGTATTTTCTCAATTGACATGGGCCCCACTGACCCTCCTTTCCGTCCAACTGCATTTATGGACAACAGCCTCAGATACTACACAAAGGTAGACAAACCCAAGGATGAATCAAACAGTTTGGACCTCAATCCAATATTGGAAGAGTCACAAGTCCCTGAAGCCACAGAAGACCCAATGACATTTGGCATTCATCAAGATGGGTTGCATTCCATCCCAATGACTCCAAATCCAACTGAAATGCTGGAGGAAATGTCCAGCAGCTCTGAGGTATTTGCTTTGGAATTCCTTTTGCATCAGCGGGCAGTTGGTACCCGAAGTAGAACGGAACAGTTTTCCAGTTCTCCAACTCCAACCGACCTCACCGTGGACAGTGGCAGCACCCTGGAAGGTTCAGCACTTGTCGACCTTCCCTTGGACCTTTCAACCGTCCCTGTATTACCTGTAACGTGGCTGCCTTCCAAATCACCCTCTCCTGAGCTCAGAGGCTCACCTGTGGGTAGTGGCAGCACTCCTGAAGCCTTTGATGTGGAGCCCACTGTAGTCCCCTTGGATTTCAGCACGGAACAAGGCAATGAATTGGTCATCTCGGTTTCTCCGGAGCCGACTGCCCTATTTGTAGAAAGTGGGAGCACACCTGATGGATGGGGTTCAGAGCCACAGGACACCGTTACGGGCTTTACCTCAGAATTCACCGCAAGCACTGAATTGATGGCGGCACCCACTGGCTATCTTCCTTCCACAGATTCAAAGAGGGACTTGGAGCTTCTGGGCCGATCTACTCTGCAGACTAGAGACCCTGACTGGACACTTCCCGAGACAACCCCAGGCCACTCACCCACTGCTGCCATGCCCTTTGTCTCCACCCCGGAGTCCATGACCTCCGCTCTGCCTCTCTCATCAGCAGCGCCCTCTGTTGGCCTTTCACCCACTGCCCAGAGTGAGCATAAAGTGACACATCCAGATACAACTCCTTCACTCACCATGGTACAATCGAAGCTCACCACCCCTGGGCTGAGAGACGCCACAAGAAGCAACACAGCTCCTGACCTTGGATCGACAGTTTCACCTCTATCGACAACAAGTCGGCTCCACCAAATGTCACCTTTCACAGTCGGCAAGCTGCAGAAAGCTCAGCCTAACTTTACCAAAGCCCCAGATCACAACCGCCTGGAGGAGAAACTATGGAACCAGCCAGCAACAACAGCGGTGGGAGAGAAGTCTTCCGCAGTCACCCTGGACTGGCTGATTGTTGCGGCGATAATCGTGTCACTGCTCATCATCCTGATCGGAGGAGTGATGATCATTTACAGCAAAAGGTTGTGTGGCAGGAAGAAGAGCTTGATGATTACCACGCAAGGAGAGGATGGGGCCACAGCCATGGAGAAGGGAACTGCCAATGGGAGAGGGGGAGATGCGTCCAAACAGGGTGAACTGAACGATGGCGCCAAGCGATCAGATGAATGGATCCAACTGATCGATAAAGACAACATGGAGGCTGTTCCCGAAGCTGCAGAAGCCACCAAGTTAATGAGAAGGGATGAATCTGGAGAACTGTCTGATGTAGAGGTGACAGCAACCACACAGGAGCAAAGCCACAAGAGTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00193	Xlink	Extracellular link domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000538	Domain	Link domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR043210	Family	CD44 antigen-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10225	HYALURONAN RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0005540	Molecular Function	hyaluronic acid binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006954	Biological Process	inflammatory response	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0016323	Cellular Component	basolateral plasma membrane	Interproscan
GO:0035692	Cellular Component	macrophage migration inhibitory factor receptor complex	Interproscan
GO:0070374	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-