| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| XP_032895113.1 | TNF RECEPTOR ASSOCIATED FACTOR | NC_045975.1 | 33424846 | 33450234 | - |
| CDS | |||||
| XP_032895113.1 | |||||
| Transcript |
| - |
| Protein |
| XP_032895113.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF02176 | zf-TRAF | TRAF-type zinc finger | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001293 | Domain | Zinc finger, TRAF-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR012227 | Family | TNF receptor-associated factor TRAF, metazoa | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR027139 | Domain | TNF receptor-associated factor 6, C3HC3D-type RING zinc finger | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0031663 | Biological Process | lipopolysaccharide-mediated signaling pathway | Interproscan |
| GO:0032813 | Molecular Function | tumor necrosis factor receptor superfamily binding | Interproscan |
| GO:0033209 | Biological Process | tumor necrosis factor-mediated signaling pathway | Interproscan |
| GO:0042981 | Biological Process | regulation of apoptotic process | Interproscan |
| GO:0045087 | Biological Process | innate immune response | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0051092 | Biological Process | positive regulation of NF-kappaB transcription factor activity | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0070534 | Biological Process | protein K63-linked ubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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