Detailed information of XP_032893563.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032893563.1PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4NC_045974.11159499811926308-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003613DomainU-box domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR041489DomainPDZ domain 6Interproscan
IPR051971FamilyE3 ubiquitin-protein ligase PDZ domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15545PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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