Detailed information of XP_032893390.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032893390.1MAKORIN-RELATEDNC_045974.144425624489918+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF15815MKRN1_CE3 ubiquitin-protein ligase makorin, C-terminalDomainInterproscan
PF18044zf-CCCH_4CCCH-type zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR031644DomainE3 ubiquitin-protein ligase makorin 1, C-terminalInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR041367DomainE3 ligase, CCCH-type zinc fingerInterproscan
IPR045072FamilyMKRN-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11224MAKORIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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