Detailed information of XP_032883747.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032883747.1LIM/HOMEOBOX PROTEIN LHXNC_045965.16939887269456975-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000719DomainProtein kinase domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050453FamilyLIM/homeobox transcription factorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24208LIM/HOMEOBOX PROTEIN LHXInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0021884Biological Processforebrain neuron developmentInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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