Detailed information of XP_032882524.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032882524.1T-BOX PROTEIN-RELATEDNC_045964.196156219731528+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilybHLH
Transcription Factors FamilyT-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00907T-boxT-boxDomainInterproscan
PF16059MGA_domMGA, conserved domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001699FamilyT-box transcription factorInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR032060DomainMGA, conserved domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR037935DomainMAX gene-associated protein, basic Helix-Loop-Helix-zipper domainInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11267T-BOX PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0071339Cellular ComponentMLL1 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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