Detailed information of XP_032879153.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032879153.1REGULATOR OF CHROMOSOME CONDENSATIONNC_045961.19633199896520679-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF03256ANAPC10Anaphase-promoting complex, subunit 10 (APC10)FamilyInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF11515Cul7Mouse development and cellular proliferation protein Cullin-7FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR000569DomainHECT domainInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR004939DomainAPC10/DOC domainInterproscan
IPR006624RepeatBeta-propeller repeat TECPRInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR010606DomainMib-herc2Interproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR021097DomainCPH domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR037976DomainHERC2, APC10 domainInterproscan
IPR041987DomainHERC2, zinc finger, ZZ-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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