Gene detail

Detailed information of XP_032877174.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032877174.1	ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE	NC_045960.1	56545923	56676334	+

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032877174.1

ATGGATCTGGGGCGAGATAAACAAGGCTGCGAAGCGCACTACTCCAACGAGGAGCAGCGGGCGTCCATGCTACCCGGCGCCGGGGAGCCGCCAGCGAGGAGCCGCTGGCAGAGCCGCCGATGCCGGCTGCTCACTGGGGTGCTGCTGGCTTTGCTGTTCATATTACTCCTTGGACTGGTCCTTGGACTTGGCCTCCGATCAAATGCAGTTGAAACCTGGAAGTGTGAGTCTCGCTGTGGTGAGAAGCGACTCGGAGAAAGCCACTGTTCGTGCTCTGATGACTGCATCCAGAAGAAGGATTGTTGCACTGACTACAATTGGATTTGTAAAGGTGAAAAAAGCTGGCTTCAGGAAGATTGTGAAGATATTGCGACACCCCAATGTCCAGCAGGGTATACTCGGCCTCCTCTCATCCTGTTTTCGCTGGATGGATTTCGAGCTGATTATTTTCAGAAGTGGAATAGTCGCTTACCTGTTTTGAGTAAACTGCGAACTTGTGGTGTGCAAACTCCATACATGATACCAGTGTTTCCAACCAAAACCTTTCCAAACCACTATTCAATTATCACAGGGCTCTACCCAGAATCTCATGGTCTGATTGACAATAGCATGTATGATGTGGGCATGAATGCTTTTTTCAATATTCGAGGAAAGGAAAAGTACAATCCTCTGTGGTACAAAGGTCAACCTTTGTGGCTGACAGCGCAGTATCAAGGTCTGAAGTCGGGGACCTTCTTCTGGGTTGGATCTGAATCCAAGATAAATGGATCGTACCCAAACATGTATCGACTATTTAACAGCTCCATTCCATTTGAAGAAAGAGTCTTCACAATTCTTAAATGGCTGGATTTGCCAGAGAAAGACAGACCTGATTTCTACGCCCTCTATTTGGAAGAACCAGATTCTACAGGGCATAAACGTGGACCTAATAACGAGAATCTAGGAAATGCGCTGGAGAGAGTGGACGCAATGGTGGCGATGTTGGTGGATGGGCTTAAACAAAGAAACCTGCATCAATGTGTCAACCTTATTGTGATATCAGACCACGGAATGGAGGAAATAGACTGTTCAAAGATTGCATATCTGAAAGATTACTTGGACACGACCGAGAACATTTATATAAGGACTGGCTCAGCTCCTCGGATAAGGAGTAAAATCGTTCCTGATGATTATTTCACATTTGATTCAGAAGGAATTGTGGAAAAGCTTGCTTGTAGATCTTCAGATCAGCACTTCATACCCTACCTGAAGCATCACTTGCCAAAGCGTTTGCACTATGCCAGCAGCAGAAGAATTGAAGACCTTAACTTGTATATGGACCCACAATGGCAGGCTGGTCTGAAACCATTTAAGTATTGCACGGGTGGATTTCATGGTTCTGATAATCAGTACAAGAACATGCAGACCATCTTTGTCGGCCATGGACCTGGATTTAAAGCCAGGACTGAAGTTCAACCCTTTTCAAGTGTTGAAGTCTACAATCTGTTGTGTGATTTGTTGAAAATCACTCCTGCACCCAACAATGGCACCTATGGAAGTTTGAATCATCTTTTAAGGAACCCTGTGTATACACCAACCCACTTAAAAGAAGCATCTTCAGCATCTTCATGCCTTTCATCCGATTTAACACCAACCATTAATCCGCAAATGAAATGTACATGCAGTTCCCTGGCATCAATGCCAAAAAATCCATGTGAGAAACTACATCTTTCCTTGGATGAAGTTGATGTTGCAGATTCTCAGCATTTGCCCTATGGAAGACCAAGGGTTGTGCAGGAGAACTTTAAATGGTGTCTCCTGCATCAACATTCGTATGTAAGTGGATACAGCCATAACAGTTTAATGCCGCTGTGGAGTGCATACACTGTCCTTAAAACAGAAAGTCTAATTTCTCCTCTGCCAAACATTCCAAACTGTACGTTTGATGATGTTCGACTTCCTTTGACTATGAATCATAGCTCATACAACGGCAGAGATAACAACAACACATATGGGTTCCTTTACCCGCCCAATCTGCTGACCGATAATAATCAGTTTGAAGGTTTATTTACCAGCAACCTTATACCCATGTACAAAGCCTTCCAAAAGATATGGAATTACTTCCACGATGTTCTGCTAGTGAAGTATGCTCAACAAAGAAATGGCATCAATGTGATCAGCGGACCAGTGTTCGATTTTGATTTCAATGGAAGGTTCGATACTCCTGATGTTATTGCAAAGAATGCCAAGGACGGGTACAACCCACCACCAACTCATTTCTTCGTAGTTCTTACTAGCTGCAAGAACAAAATGCAAAGCCCTCTGCAGTGCAAGGACTCACTGGATGTATTGGCTTTCATTCTGCCTCATAGACCTGACAACAGTGAAAGTTGCGCAGATGGCAAAGAGGAATCCCAGTGGGTAGAGGAGCGAATCTGGGCTCACAGAGCTCGAGTACGGGATGTGGAGTTGATCACTGGACTTGATCTTTATCAAGAAAGCAAGCAGCCAGTCACAGAGATCTTGCAGCTCAAAACATTTCTACCAACAATTGAAGATCAAATTTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01033	Somatomedin_B	Somatomedin B domain	Family	Interproscan
PF01663	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001212	Domain	Somatomedin B domain	Interproscan
IPR001604	Domain	DNA/RNA non-specific endonuclease	Interproscan
IPR002591	Family	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR020821	Domain	Extracellular Endonuclease, subunit A	Interproscan
IPR036024	Homologous_superfamily	Somatomedin B-like domain superfamily	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR044929	Homologous_superfamily	DNA/RNA non-specific endonuclease superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10151	ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004528	Molecular Function	phosphodiesterase I activity	Interproscan
GO:0004551	Molecular Function	dinucleotide phosphatase activity	Interproscan
GO:0009143	Biological Process	nucleoside triphosphate catabolic process	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0030500	Biological Process	regulation of bone mineralization	Interproscan
GO:0030505	Biological Process	inorganic diphosphate transport	Interproscan
GO:0045599	Biological Process	negative regulation of fat cell differentiation	Interproscan
GO:0046034	Biological Process	ATP metabolic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-