Gene detail

Detailed information of XP_032869339.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032869339.1	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12	NC_045993.1	536577	578653	+

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032869339.1

ATGTCGGAGCGGGCGGGAAGCGGGGTGGCGGCCGCAGCTGCCGTCGCAGCGAGTGAGAAGCGGCGGCAGCAACTGCAGCGCTGGAAGGGCTCGTGTACCGATCTGGAGGCGGGCGAGCCGCGATGGCGGGCGAGGCCTGGAGCGGGAGCGAGAGCGGGAGCGCCGCGGCGGGTGCGGTTCGAGGCGGCGGCGGAGTTCCTAGCGGCCTGTGCGAGCGGTGACGCGCTGGACGCCGAGGAGATGCTGGGCGGCGGCGCCGACGTCGACTGCGCCAACACGGACGGCATCAGCGCCCTGCACCAGGCTTGCATTGATGAGAACCTGGAGATGGTGGAGTTCCTGCTGAGACAGAATGCCAACGTTGACCAGTCTGATAACGAGGGCTGGACACCGCTCCACGTGGCCGTTTCTTGCGGCTACTCCGAAATCGTAGAATGTTTAATCAACCATGCGGCCAGCATTGCTGCAGTGAACAGCGATGGCCAGTTGCCAATTGACCTTGCAGAGGAGAACTACATGGAGAACCTACTGCAGGCTGAGATTACTAAGCAGGGGATCGACGTGGAATCGGCGAGGCGTGAAGAAGAGGACTTGTTGCTGCAACATGCCCGGCAGTGGCTAAATAGCGGCAAGATTGAAGACATATCTCACCCGAAAACTGGTGCCAACGCTCTCCACGTTGCTGCGGCCAAAGGCTACATAGAAGTGATGAGGCTGCTCCTCCAGGCTGGCTTCAGTGTGGCTGCACGGGACAAGGATGGCTGGACACCACTGCATGCCGCCGCACACTGGGGCATGGAGGATTCTTGCAAGCTCCTCGTCGAGCACTTCTGTGACATGGAAGCCGTTAATAACTCGGGTCAGACACCGTTTGATGTTGCAGATGAAGATATTTTGAGTTTACTGGAGGACCTGCAGAAGAAACAGGACGATCTGAGGACTGAGAAAGAAGAAAAGATGAAGCGTGCCATCATCGAAACATCCACACAGCCGCAGCAACCGTCAACCAAGCCAAGGAAGAGTTCAGTCTGCCGGATGAGTAGCAGGGAAAAGATTTCTGTGCAGGACCTGTCAAAGGAACGCAAAACCTTGGAGACGTTGTCTTTGGATGAAAGCAAGAAAGAAGAATCCAGCAGTTCCAGTTCGGAGACTGAAGATGTTTCCGATTCTGACTCTGAATGTGAAACCGAAAAGAAGAGATCTTCCCTCAACGATGCCAGCAACGTAAATGGGACTGAAGTCTTGCCCCGCGTTCCTGCCGTTACTCTGGCACCATCCGGTCTCAAGGGCAAAGATGTGGCGGAACCGCGGCTGGCTCGAGTGCCTCCAACACCAATCGGGCGATCGCTGAGTGTGCCTGAGACTTGTGCTGAACAGCTAGTGAGCTCTACATACCAGAAAGTGAAAGACCCAAACTGCCAACAAGGAGAAACCACTACTCCAACTAGCAACGTCGACTTTAAAGAGAGGCGCAAATTGTACCTCACCCCGGTACGTGACGAGGAGTCGGAATCGCAGAGGAAGGCTCGCTCGCGACATGCCCGACAGTCCCGGCGATCGACACAGGGGGTCACACTGACAGATCTAAAGGAGGCTGAGAAGACCCTTGGTATTTCTACTGAGAAGAAAACCCAAGAGCAACTGGAAAGGAGAGAAGAAGTGAAGGAGAACGAGGGCAAGAAGGAAAGGAGTTCATTGAGTGAGGACAAGGATGCGGCCAGTCGGCTGAGACCCGTCACCACGGGCGTTGGTAACTCTGGCTCGGCGCTTGCTCCTACACACTCCAGACATTCTACTCCGACAGTTTCATTTCAGGACGCCGATACAGGCGCGGAGTTGGAAAGTGACAGACGGGAAGAGGGAGACGCGGACTACAACAGTCGGAACCGGCTGTCTGTGCGAGACCGGCGGAAAGCCAGGAAAGAGCGCAGGTTTACCGGCAAGGCAGATTCCACAGAGGAGGAGGATGGCACGGAGCAGATGAACAGCTTGGATACCCCAACACACAGCTCGCTTCCAGCTGACCAGATGGGTGATTGGATTGAGAGCAGAGTCGGGATTCATTCCCTGCACAGTACAGGGGCCAGAGCAGACAGTAATGGGGACTTCAGGAAGATGTACGAGATGGTGTTGTCGGAGAATGTCAGGCTCAAGGAGCAGCTACGAGATGCACAGTATTACCTCTCACAGGCCAACCGTGAGCTGGAGAGGGTGATGAAGAGGCAGCAACGTGGAGACCAGCCTGCACGGCTGGAGCTGGAGAGATTTGAACGAAGGGCGTTTGAAAGAAGGACAGCTGAACTGGAGGAGAGGCTAAAGATCTTGACAGACCTGAAGGTGGACAACCAGAGGCTGAAGGATGAGAACGCCGCACTGATCCGCGTCATCAGCCGGCTGTCCAAGTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF15898	PRKG1_interact	cGMP-dependent protein kinase interacting domain	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR017401	Family	Protein phosphatase 1 regulatory subunit 12A/B/C	Interproscan
IPR031775	Domain	cGMP-dependent protein kinase, interacting domain	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR051226	Family	Protein Phosphatase 1 Regulatory Subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24179	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004857	Molecular Function	enzyme inhibitor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0019208	Molecular Function	phosphatase regulator activity	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-