Gene detail

Detailed information of WZF232910 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF232910	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	HiC_scaffold_1	4488632	4491751	+

Gene Structure

More details in Jbrowse Sequence

CDS

WZF232910.1

ATGTTTGAAATTCCTAAGTTATTAAACACACCAACACGGAAGGCAATGCGTGAGGTGTATTTGCAAGATGAGCAAGTTGTTATTCAAGAATGTTATAATGAAAGCAAGCTTACTGCCCAGCAAGATATAGATGTGCAGAATTTTTCTCGTAAGTTAGTTGAAAATGTTCGTTTAAAAAAATCTTCACTTACAGGTGTTCAAGGTTTAATGCAGGAATATTCTTTATCTGATAAAGAAGGTATTATACTAATGTGTTTGGCGGAAAGTTTATTGCGTATTCCAGACAGTGAAACGGCAAACAAACTTATTGACGATAAATTGCGAGAAGGTGATTTTGTTTCCCATATGGGAAATGGTTACACTTGGTTTGTAAATGCATCTACTTGGGGTTTGGTAATTACGGGTAAGGTATTAAAATTAGATAACAAGGGTTGGTCAGGGGTTCTTTCTGGTCTTGCTAAGCGTACATCTGTGCCAATCATTAGAACTGCTGTTGGTCAAATGATGAAAATACTTGGCCGTGAATTTGTATTAGGTGAAACTATTAATAATGCTTTAGAGCGTGCCACAACTATGGAAAAAAAAGGATACCGTTATTCATATGATATGTTGGGCGAAGGTGCATTAACACATGACGATAGCGTAAGGTATTTTAATGAATATGAAAAAGCATTAAAAACTATTGGTGAAAAAACTAAAGGTAATGATGTTTATGATCGTGCAGGTATATCAGTAAAAATTTCTGCGATACACCCTCGTTATGAATGTATAGAACATCACCGTGTAATATCTGAGGTTGTTCCACGAATTAAACAATTAGCATTACTAGCCAAAGAATATAATATTGGTTTGTTTATTGATGCTGAGGAAATGGACAGAACTGATATTTCACTTGATGTGGTTGATGTTATTTTATCGGATGAAGATTTATCAGGTTGGGACGGATTAGGTTTTGTTGTTCAAGCATATAGTAAGCGTGCAAGATATGTAATTGAAGACTTAGCAAGTATGTGTAAAACATATGACCGTAAAATTATGGTTCGTTTGGTTAAAGGTGCATATTGGGATAGCGAAATTAAGCGTTCTCAAGAAATGGGATTAGAAAATTTCCCAGTATTTACGCGTAAAGAGCATACAGATGTATCATATATTGCGTGTGCTAAAAGATTATTTAAGTATAACAATTTTATATATTCTTGCTTTGCTACACACAATGCTCAAACAGTTGCGACAATTACAGCAATTGCAGGCGATATAGATTATGAATATCAGAAATTACACGGAATGGGTGACCATATGTATACAATGGTTACAGAACAGAATAAAAAAGTTCCTACACGTATTTATGCACCTGTTGGTAATTATCGTGATTTACTTCCGTACTTAGTACGTCGCTTGCTTGAAAATGGTGCTAATAGCTCATTTGTGAATAAAATTTTTGATGAGAACATTGCAATAGAAGATCTGATTAGAGACCCTCGTGAAGTATCTAAGGAAGCTAGCTTCACTCGTCACCCAAAAGTATTGCTTTCGCAAGATATAACCCAACCTGAACGCAAGAATGCAAAAGGAATTGATATGACTAATATTAACGATATGAATAAATTAAAAGCTGAAATGGACGCTTACACAATTAATACTGAGGCTTTCTTGCTTATTGACGGTAAAGAAGTTAAGGGCGAAGTCGTTGATATTATCTCACCACAAAATACAAGTGAAGTTGTTGGTAAGGCACATTTTGCTAATGAGACAAATTGTAAAGATGCTTTAACATCTGTATATAAAGGTTTTGATAGTTGGACAGTGAAATCGGCTGATGAGCGCGCTAATATTTTAGAAAAATCAGCTGATATATTGGAATCTCATACTTCTCAGTTTATGAAGTTAGTTACAAAAGAAGCTGGTAAAACAATGTTTGATGGCATTGCGGAGGTGCGTGAAGCTGTTGACTTCTTGCGTTATTATGCAACAGAAGCTAGACGATTATTTTCTTCTCCTACAGAACTTCCAGGGCCGACAGGGGAAAAGAATTTGTATGCACTTCACGGTCGCGGAGTATTTTTCTGTGTTAGCCCATGGAATTTTCCACTAGCTATTTTTCTAGGTCAAATTTCTGGTGCATTATCAGCTGGTAATACGGTAATTGCAAAACCAGCGGAAAGTACTTCTTTAGTGGCGTACGAAGCTATTAAAGTGTTATTTGAGGGAGGTCTTCCAACTGATGCATTAGCATTAGTATCTGGACACGGTACAGTTGTTGGCGACGCATTGTTATCTGACAACAGAATCGCAGGCGTGGCATTCACTGGTTCAATAGAAACAGCACGCTTTATAAACAAAGTATTAGCAGACAGACTTGATGGTATTATTCCATTTATTGCTGAAACTGGTGGACAAAATGCAATGATAGTTGATAGTTCTGCCTTGGCAGAACAGGTTACAAGAGATGTTGTTGCAGGTGCGTTCCAATCAGCAGGTCAGCGATGTTCTGCGACAAGAGTTCTGTATATTCAAGATGATATTGCCGATCACCAAATTAAGATGATTTCAGGTGCAATGAATGAATTGAATATTGGTGACCCTGCCGATATAAAAACTGATGTTGGGCCAGTTATTGATACAAAATCATTAGATATTTTAAATGCTCATAAAGAAAAAATGAATAAAACGGCTAGAAAACTTGGTGAAACTCCAATGCCTAGCGGTACTGAAAGAGGAACATTTTTTGCACCAGTGATGTATGAAATTAACAGCATTAATGAATTAGAGCGTGAAGTATTTGGGCCAGTATTACATGTTGTTCGTTGGAAAAATACTGATTTAGACAAAATTATCTATGAAATTAACAATACAGGATACGGATTAACATTTGGCATTCACAGCCGTATTGATGCAACAGTCGATTATGTCGTTTCAAAAATGCGTGTTGGTAATGCATATGTAAACCGTAATCAGATTGGTGCAATGGTTGGGCAACAACCGTTCGGTGGAGAAGGAAAATCAGGGACAGGATTTAAAGCAGGCGGACCACATTACTTATTGCGTTTCTGTACTGAAAAAACAATATCAATTGATACCACTGCAGCAGGTGGTGATGCCACCCTAATGGCAGAAGTGTAA

Transcript

WZF232910.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan
PF01619	Pro_dh	Proline dehydrogenase	Family	Interproscan
PF14850	Pro_dh-DNA_bdg	DNA-binding domain of Proline dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002872	Domain	Proline dehydrogenase domain	Interproscan
IPR005933	Domain	Bifunctional protein PutA, C-terminal domain	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR024082	Domain	Proline dehydrogenase PutA, domain II	Interproscan
IPR024089	Homologous_superfamily	Proline dehydrogenase PutA, domain I/II	Interproscan
IPR025703	Family	Bifunctional protein PutA	Interproscan
IPR029041	Homologous_superfamily	FAD-linked oxidoreductase-like	Interproscan
IPR050485	Family	Proline metabolism enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42862	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0003842	Molecular Function	1-pyrroline-5-carboxylate dehydrogenase activity	Interproscan
GO:0004657	Molecular Function	proline dehydrogenase activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006561	Biological Process	proline biosynthetic process	Interproscan
GO:0009898	Cellular Component	cytoplasmic side of plasma membrane	Interproscan
GO:0010133	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-