| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| WZF229940 | LIMKAIN B LKAP | chr14 | 68872047 | 68997071 | + |
| CDS | |||||
| WZF229940.1 | |||||
| Transcript |
| WZF229940.1 |
| Protein |
| WZF229940 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01936 | NYN | NYN domain | Domain | Interproscan |
| PF06003 | SMN_Tudor | Survival motor neuron protein (SMN), Tudor domain | Domain | Interproscan |
| PF11608 | MARF1_RRM1 | MARF1, RNA recognition motif 1 | Domain | Interproscan |
| PF12872 | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| PF19687 | MARF1_LOTUS | MARF1 LOTUS domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002999 | Domain | Tudor domain | Interproscan |
| IPR010304 | Domain | Survival motor neuron, Tudor domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR021139 | Domain | NYN domain | Interproscan |
| IPR024768 | Family | Meiosis regulator and mRNA stability factor 1 | Interproscan |
| IPR025605 | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR034189 | Domain | MARF1, RNA recognition motif 1 | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR041966 | Homologous_superfamily | LOTUS-like domain | Interproscan |
| IPR045602 | Domain | MARF1, first and second LOTUS domain | Interproscan |
| IPR047298 | Domain | Survival motor neuron protein, Tudor domain, eumetazoa | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14379 | LIMKAIN B LKAP | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005777 | Cellular Component | peroxisome | Interproscan |
| GO:0006397 | Biological Process | mRNA processing | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:1905762 | Molecular Function | CCR4-NOT complex binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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