Detailed information of WZF101900 in Chaetoderma shenloong Gene info
Gene IDAnnotationChromosomeStartEndStrand
WZF101900DNA REPAIR/RNA PROCESSING CPSF FAMILYchr99696936297068350+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DDB1

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan
PF10433MMS1_NMono-functional DNA-alkylating methyl methanesulfonate N-termRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR018846DomainCleavage/polyadenylation specificity factor, A subunit, N-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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