Gene detail

Detailed information of Sda_chr09g03271.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr09g03271.1	AXIN	Sda_Chr9	241508186	241537709	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr09g03271.1

ATGGCAGGGTTATCCTGCGGCGATGAAGATGATGCACCATTAGGATTCGAACCCGAGGGCAGTGCTGCTAATTCTCCTCCGTTTTATGAGGAAAATTCAACGCCATCTTACTGTAAATGGAACGTTTGTTTGGATAACCTTCTCGATGACGGAACTGGTGTCGACCTCTTCAAGGAATTTCTCAAACAAGAAATAGGCACTACTCACACACTTGAATTCTGGTTTGCATGTCAAGGTTTAAAAAAGAAAGACAAGGATGATACGGAAATTCCTAAAGTTGTTAAGGGTATACATCGTATTTATATACGGGGTGATTTCCTGAAGTGCATAAATCATGACACCAAACAAATTATCGACATCAAAATCAGTCAGAAGGAGTACACAGACCAGAATATTTATAATACTGCTCAGGAGGAGGTTAAAGACTATATTCAGGATACGACGTATCCGTTGTTTCTTCGATCGGATATCTATCTTCATTATGTTCAAAATGCTGGGAAGAGCCCAAAAACCAGCAATTCCTCTAGTGGCTCGAACAGCGTGCGTCCCTTATCAGGACCTTTGCCAACACTCGTTGAAGACTGTGAACTCAGTCAAGAGATTTCCATGGTTAATACTTCCTGTAATAACAACTCGTATCTTTCGGACTCTAGCTTTAATAATAGTTCCTGCAGTCGATCGTCCAAGGTAGCAAGAAAGAACGAGACGCTTGGAGGCTATGCAACGTACTCTAGATCTCGACCGCTTCATCCTCTCGATGTGTCGTCTTTCGTTCCTGTTTCTCTGCAAGAGAGTGAGCTGCAAAGTTCAAGTGATGCCCTCACGGACGACACCGTTTCTCTCACTGATAGTAGCATATCTGATATGCCGGTACCAAGAGACAGTCGTTATTGGAGAAAGCAACGCAAGATGATGAAAATTCGAGCTGAGTTGAATCGAGAAAGCACCAAAGGCATTTACGGATTTGTTCCTCGTACAGACAGAGCTCCAAAAGATCGGAACTTAGCAGAAACAGACCCACCACGTTTCTTTCTGTTATTGAAAGAAAAGCTGGATGAAGTCTTAGCCGCGCGTGAAAAAGAACAGAGATCCAAGGAGAAACTGAAAGAGAAACTACGAAACTGTGAGAGCGATGGTTCTGAAGACAAGGGGCTCATGAACACTTCTCGGAATACGACTACGAACTCAATCCTACAAGTGATGCAATCAAGTTTCATTGAAGAGGAGAATGCTCAGTCTATTCTGGAGGAACATGTGAGTCGTGTGTGGAGTAGTTCTAATCAACAGACACCTATTCGTTCACCTGGGAGGACTAAGAGCCCGGAGCGGACTCGTAAGGGAGGACAACTCCTCCCTGCTACCCCCGCGGCACATTCTAGGGTGCATAAAAAGAAGGATCGCGATAAGTTTCATTCCGCCCATTCTTTCGACAGTGGAGTTGGTGAGGATAAGACGATCTTCTGTGGTACGACTGAAACTCATCGTCACGTACACCATCACCATTATTATCACCATGGTGATGAGCATAAAAACAAGTCACGTCATGGAGATAGTTGCTGGGCGGAGAACTGTGATAGGTCAAGGAACAGCAAGCGTTCAAAAACGAAAAGTTCTGACACTGGAAGTAACATTGATAGTGGAATTTCTATGGTATTTGATAGGGACTCCTTGCCACCGAAGCCGAATCTTACTGCAGCCAACAGTGATAAGGTGCTGCAGTGGATGATGGAGTCGGATAAAAGAACAGGCAGCAGTCAGTCGCATCAAGATTCCGATAAAAATTCTTCACGGAGATCTCATCGGCAGCATCCATCCAGTTCAGGGTCGCAACCTTCTCACAAACAGAGTTTGGCCAAGAAGTCCACGTCAACTGGCAGGTCATCCTCTGTTGACCGGGTTAGTGCTCAACCACAGTGGCCCCTTGGTAATGGTAACCAGGTGCTACCGTCACAACCTATCATACAAGATTCATCTATGCCACCCATTCCATGTCCTGATGTGACAGTTTCATTGGAGGAAGCTAGACGGCGGCTAGAGGAACAAACTCGGACAGTTCCTGTTAAATCGAAGTCATTCGCAGGAACCATTCCGAAGGAGAAGGCCTCTGTACAAAGTTCTCTGAGCACGTCACTGATACAGAGGGCCCAAAATACACGGACATATCCCACCAATCTGGATATATCCAACACCAGTACTTCAGAAAAGAAGAACAACAAAAAGCTCTCGTCCAGTGTGCCGACGACACCAAACACATCGACATCACAGGAGGAGACTGTCATCGGTTATTACTTCTGTGGGGAGCCAATACCTTACAAACATACGGTGCCTGGGCGAAATATTACTCTCAGCATTTTCAAGCAAGTCATCAGCAAACCTGGGACATTCAGGTACTTCTTCAAGAAGTCATGTCCAGAGTTTGATTCTGGAGTCGTGTTCGAAGAAATCAGTGATGATAGTACTATCCTACCCCTTCACAATGGGATCATTGTCGCAAAGGTTGACAAAATTGATTCATAG

Transcript

Sda_chr09g03271.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00615	RGS	Regulator of G protein signaling domain	Domain	Interproscan
PF00778	DIX	DIX domain	Family	Interproscan
PF08833	Axin_b-cat_bind	Axin beta-catenin binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001158	Domain	DIX domain	Interproscan
IPR014936	Domain	Axin beta-catenin binding	Interproscan
IPR016137	Domain	RGS domain	Interproscan
IPR024066	Homologous_superfamily	RGS, subdomain 1/3	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036305	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR038207	Homologous_superfamily	DIX domain superfamily	Interproscan
IPR043581	Family	Axin-like	Interproscan
IPR044926	Homologous_superfamily	RGS, subdomain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46102	AXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008013	Molecular Function	beta-catenin binding	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0030877	Cellular Component	beta-catenin destruction complex	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0032436	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0045860	Biological Process	positive regulation of protein kinase activity	Interproscan
GO:0048468	Biological Process	cell development	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan
GO:0090090	Biological Process	negative regulation of canonical Wnt signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-