Gene detail

Detailed information of Sda_chr09g03263.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr09g03263.1	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	Sda_Chr9	240885197	240971835	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr09g03263.1

Transcript

Sda_chr09g03263.1

ATGGGAACACTGCGCGATTTGCAACTCGCTTTGTGCGAAAACTTGCAACAACTTCGCCAAAGAGATCAGTTAATTGACGAGCTAGAGAGTGAACTGGACCAAAAGGACACAATCATTCAGAAACTGCAAGTTCAACTAGATAAATACCGATCGGTTTTAAAACCTGGGAGTAAGACTGTGCACCACGAACGGACGAAGAGGACTGCTATTTCCGGAGAATCAGTGAACGCTCGGGAGATCCAATCCCTGAACGTGTTCAAACGTGTGAATAAATCGCAATGTTGTAAAGATCTGATTCGATATGCCATCTTGGACAACGACTTCATGAAAAATTTGAACTCTTTCCAAATCAATGAAATAGTGGAATGTATGTACCCTGTTTCTCATGAGAAAGGAAGTGTGATTATAAAAGAAGGGGATGTCGGCTCAATGGTATTCGTCATGGAAGAGGGGCAGGTTGAAGTCACCAAAGACGGCAAGAAGCTCTGTATTCTCGACCCCGGAAAAGTATTCGGAGAACTAGCTATTCTCTATAACTGTACGAGAACGGCAAGTGTCAAAGCTTTAAGAAAATGCAAGCTGTGGGCGATAGACCGTCCATGTTTCCAGAGTATTATGATGCGAACGGGCCTCTTAAAACACACAGAACACATGGAACTCCTTCAACGGGTTCCCACTTTAAAAGATCTTCCAGAAGATATGCTCAGTAAGATAGCCGACGTATTAGAAGAGGTGCATTATAGTAAAGGCGACTACATTCTCCGGCAAGGAGCCAGAGGCGATACGTTCTATATAATTGCCAAAGGAAAGGTGAAATTAACGAAGAGAACATCCACAGTAAATGATGACCACACAGTCAGATATTTAAAAAGGGGCGATTATTTTGGCGAAAAAGCTTTACACGGGGAGGATGTGAGGAGCGCAAATATAATCGTCGACGACCCAGGTGGTACGGACTGCCTCGTTATACATAGAGAATTATATCTTCAAGTATTATCCAATTACAATGAATTCCAAGCTAGTGACGACGATATTGTCGACGCATACACCGTTGACTCAGAATTCGCCGATGTGAAAATGAACGATTTGTACGTGCTTTCAACACTTGGTATCGGTGGATTTGGTCGAGTCGAGCTGGTTCATATATCAGGCGACCAGAGTCGGACGTTTGCACTAAAAGTTCTCAGGAAACAACACATTGTTGAAACGCGACAACAAGAGCATATAATGAACGAGAAAAAAATCATGCTGGAAGCCAACTGTGATTTCATTGTACGGATGTATAAAACATTCAGGGACAGTAAGTTTTTATACATGCTGATGGAAGTGTGCCTTGGTGGAGAGCTCTGGACAGTATTACGAGACACAGAGGGGGGATGTTTCGATGACTCGACTGTCCGGTTTTATGCAGCTTGTGTAACAGAAGCATTCTCTTATCTCCACACTCGGGGAATAGTTTATCGAGATCTCAAGCCAGAGAATATTCTACTAGACAACAATGGCTATATCAAATTGGTTGACTTCGGTTTCGCGAAAAGAATAGGGCATGGTCGTAAAACATGGACGTTCTGTGGCACGCCGGAGTATGTTGCCCCGGAAATTATCCTGAACAAGGGCCACGACATCTCGTCCGACTTCTGGTCGCTAGGAATACTCATGTTTGAACTCCTCACTGGAAGTCCACCATTCAATGGCACTGAGGCCATGAAAACCTATAACATCATATTAAAAGGCATAGATGTCATCGATTTCCCGAGAAAAATCCAGAAACACGCCCAGACTCTAATAAAGAAGTTATGCAGAGAAACGCCTTCAGAGAGACTCGGTTATGGGAGAGGGGGTATTCGTGATATTCAGAAACATATATGGTTCGACGGGTTTAACTGGGACGGTCTGAGGAGACGAACGATCAAACCACCAATAGTGCCTAACGTTAAGTCATCATTAGATGTGTCGAATTTCGACCCTTATCCGGAGGACGGAGACGAGGATTCGGCTGAGGATGATCTGACTGGTTGGGATGATGACTTCTGATCAGACGTCATCACCCGCGATTTGTGATACCATGGCAACAGTTGTGCATTTGTGATAAGCGCTAGTCGACCAGAAATGCATCCACTGGATTTATCAGTTCCTCACAACGAAAACTTTAAGGAGACTGTTCAGTGGATCGACCCATGCCTTATTTGTACCTTCTGGTGTGCAATATTGACGTGGACCGGTGTTCCGTGCATGGGCATCTGCTCACATATTGCTTCCGTGCATCAACAGCACCGCGAGTCTCCGTCAACAGTATCATTCGTGAGTTTCCGTCGACAGCACCGCGAGTCTCCGTCAATAGTGTCATTCGTGAGTTTCCGTCGACAGCATTCTTCGTCAGTCTCCGTCGTCAGTATTGTTCCCGTGAGTTTTCGTGGATGGCATTCGATTGCATTGCACCGGAAAGCGAATTTTCGACAGCTGTTTAAGGAAAGGTATATAGAGAGGTTATCGTGTGTTGTGCACACGAGTTAGGCGTCAAGCAAAGTTGATAAACTGATGAATCCCGTCTTGGAAGTAGGCTTACTGTGATTTCGAGATGCCTGATCGACATGGATTGTTGAACTGAAATTCAACTGTTATTCTATCGTCTGACTGATCAACCCAGTCTAGATTGTATACATTTTAAACATGTTTCTGTCACCGCGGGACGATACATCCGTCTCTCTTTATGGAACAGTGTTTGTCTGCCGCATGACCACTAATTACCATGAGCCTTCGCCAGCAGTGTCTTGCATAACCCGAGAACAGTTCCAGCACTATATATACTATGAACATCCAGCTCTCTCACCAGAACACGTGGATTTGTTACCGCGTACCCTTTCGCCGACCCATACTGTACTCTTTTGTTATGGTGATTATGTTTATAGTGTTAATCATGGTACTTTATTTTCGAATGCCAAGATCACATTATACACAACATATTCCATATTATATACCATTTGGAAGATGAACCAGATATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF16808	PKcGMP_CC	Coiled-coil N-terminus of cGMP-dependent protein kinase	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000595	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000961	Domain	AGC-kinase, C-terminal	Interproscan
IPR002374	Family	cGMP-dependent kinase	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR018488	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan
IPR018490	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR031831	Domain	cGMP-dependent protein kinase, N-terminal coiled-coil domain	Interproscan
IPR035014	Domain	cGMP-dependent protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24353	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004692	Molecular Function	cGMP-dependent protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-