Gene detail

Detailed information of Sda_chr09g02687.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr09g02687.1	SERINE-THREONINE PROTEIN KINASE	Sda_Chr9	201240148	201282473	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr09g02687.1

GCACGAGCTCCTGGATCAGCCGTGATAATAGTCGGAACTTACTTAGACCTACTCCGGGATCGAGCAACAAGACGCACATTCCCTGATGACTTTGAAGACTCAATGACTGCACTCATTGACAAATTGTACATCAGAATCGCAGAGCACGAGAAGTGTGGGCTTCCGAGTGTTGTGGGGAATGTGAATGTCAGTTGTAAAACTGGGGAGAACATGACCATCCTCGTTAATTTGATCTATGAAAAAGTGTTTGAACTACGGCACCCCAAAGATAAAAGTCAGAAGCTGTTAGGTCAAAGGGTTCCTCGAATTTATGTCACCCTGCAGAGCATCGTCCGAGAAATGGCAGCTGAGAGAATTCGTGAAAATAAAGATCCAGTTGTATCAAAGAGCAAATATGTTATGATGGCTATGAACCAAATGACTCAGAGAACAAACAGCACATTCCGAGACACAGAGGAGTTGGAACAAGCAACCACATTTCTGCAGGAGCAGGGTGTGATCTTCCACTTCAAAGACTATTCCTTGAAGGATCTCTATTTTCTGGATCCACAGTGGCTTTGTGATCAACTAGCTAGAGTTGTAACAATCAGGACTATCAATGGTTTCTGCAAAAGTGGTTTGATGGAAGTGAATAGAGTTTGTCACTTGTTCAAGTCACCATCACCCAATGTGCGGCCTGAAGACATTGAGTGTTATATCATCAATCTGCTAAGTAAGTTTGAGGTCGGCCTGCAGTTTGATGAGAAGCATATTCTCTTGCCGTCTCTTCTACCACCTGCTTCAGAAAGGAAGAAATATGACATCAAGATTCCATTGCGGAAACCACAGCAACAATCTGTTGTTTTGGATATACAGCAATCTGCATCCAGTTATGACCCAAACAATATAAACACAGAGCCATTACACGTGGGTAGCTCAACATTTTTCCCTGGGTCATACATAAGACCACACCGTAACATACAAGCTACTCAAGCATCCTCGGATTCACGTCTTCATCACCTGAAAACGGAAGCTCATTTTAACGTGATGTTTTCTCATTGCCGTCTGTATTTCCTGACTCACTTCCCCAGCGGCTTTTGGCCGAGGATCATAACAAGGATTTTGTCTGATACATCTATATTTGACATCACATCGAAATTGTTCCCTCTGTCTGAGGAACTTTGCAACAGATGCCCTGAGGATATCAAAGTTCTCATGGATCCTGAATGGAGATGTTGGCAAACTGGACTTGAACTTGTTTTGTATGGAAAACCTATACTCCGTATTCAAGAATGTTTTCAAGAAGGCCAGGAGAGTCTATGCAACTATTTTATATGTGACTTTAAGGTCCACCTTCAAGGAACATGGAGTTCGATGGTAGTTCAGAACAGTGCTATTCTTGAGATTTATTTCCCTGCTGACATGTTGTCATTTCACTTTAGTAACGAAGCAAGAGGAATCACAGAACTGGATAAAACTGACGAGGAAAGTTGCGTGTACAGAGACGAGCAGGCTTCAGCTGCCATGTTAGCTAAAATAGCAGACTATATCGACATGTTGCTCCACGATTGGTATCCTGAGATTGGGGAGGACCGATTTGCCCAAAATTGTTTTGGTCGATATCTCATTACCCGATCCATTCCATGCCCTACCTGCTTGTACCATCAGATATTACAGTCCGTTCAGCCAGAGAATGACCCCGAGACGTGGCATCAGGTCAACGATGATGCAGAGATTGTGTCTTATTTCTCTGCAAATGGCAAGGAAACCATGCCGTCTAATGGATCAAACAAAATATACACATTCCTGGTGGAACAGTGCATACTCAGGGCGTTAGAAAACAGAGCAAGTGTTTGTCCTATCCATGGTATTGCATCACCAAGATTTGTCACAAGTGAAAGCGGGTCTGAAAGTAACAAGATGATGTTGGCACCCGACGTAAATTTTCAAGATCTTGACAGAGATATCATGATGAGTAATAAGGAGATTATTCTCGGCAAATGTATCGGTGAAGGTAGCTTCGGTGAAGTTCACCAAGGAACCATTGTTTCTGAGGTAACTTGTTTTAAAAATAATATTTGTATGTTTGAAGAAATTGGAGAAGAAGGCCTACTGAGTCAGTCATGCACATCATACCTGACAACCAGACAAGAGGTTTCTTTATTGCTACGACTCCAGCACCAAAACATCCTGTCCATGCATGGATTGACTGTAAGCCCATTACAGCTGCTACTTAGTATAGCACCGGAGGGTTCATTGGACAAAAAACTGGAGGAGGTGGCTAACAGTGGAAGTACACTGCCGCTGTTTGTCATCAAACAAGTCAATTATCAGATAGCTGATGCTCTTGCATACCTCCATTCATTATCTGTGATATTCAGAGATCTGAAGTCTGAAAACGTCCTTGTGTGGTCACTACCAACAAGTAAAGATGTCAAACCCAGCAGCAAATCTGCCGTGCTAGTGAAGCTAGCTGATTACGGCATCAGTCGATCTGTGTTGCCAACAGGACACAAAGGATGGGGCGGAACACTTCCATTCATTGCTCCAGAAATCCTACAATATGGAGGTAGATTCGTCTATAATGTCAAGGTGGACATGTTCTCATATGGTATGTTTGGATTTGAGTTGGTAACCTGTCGCCAACCACTAAATGAAATAAGGCATAATATGGCCATGCATGTGAGTCAGGGAGGAAGACCACAAATAACTGAAGAGGAAACTAACCTGCCACTACATGTGCTAGATCTCATAACAGTGTGCTGGGCACATGACGCCAATGATCGGCCTTCTGCAGCCGAAGCCAAACAAATCATCAGTTCCCCACAGTATTGTCACCTCATGGACGTTCTTCGTCTCGGAACCTATGTGACAGTCTTCTGTGCTGTGTCTTATCCCATACCTGTGATAGATGTCTATGATGATATGGATGTTTCATACAACATGGCTGAACCTGAGTGCCAGATATGGTACAGTGCTTTGCTCGGGAATCGCCCAACGCTTGAAGTTCTCACTTATGGCTCAACATCCAAGAAATGTCTGGACTCCAAAACATTAACAGGCATTGAGAATGAGATCCTTGCCATAGCAACTGTGGGAGATGACGTCTGGTGCCTGTCAAAGCGAACAGCTGTTGGCATAACTCACTACCTCTTACATGTCTACAGTACCGTGACACTTCAAGAGATTCAGACAGTTGAATTACCACAGATAGAGAATCCTGCTCGTCTTCTGAATATACACCATGTCCCTTCAGAGGGAGTTGTCATTATAACGTACATGAACAGCAGTTTTATGGTGTTTAAGGACAAAGTTAAGGATCTCTCCCTTGAAGTTTTAGTTTCTTATGATGACCGTTGCACATGCTATTGTTCTGCTGTTGTCAAAAACAGATCAAGGTTTGAGATTTGGTTTGGAGTGACTGGTGGTAAGATCAACATATGTGAATGTAACCTGGATGGAACCAATGATAGTAAATTCACACTCGACCATTTCGAAATAGCAATACCCAGTGTCTGCTGTCGCTTCTTAGTCACGCATTCCACTAATGATAATGGCTGTTCTCTCTGGTCCTACAATTATCCAGGGTCTGCTGTGTATAAGTGGGACACTTCAAGACGAGTGCTGGAGAACTATAAGCTTGACTGTTCTAAGGTGATCCCAGACATCGGATCGGAGGGCGTCAGGGGAGCCCAAGTCGACTCTGGGAGGTCACAGGTCACTTGCATCAGTGTGATTGACAAGTATTTATATGCTGCCACAACATGGGGATGTATCATTGTGGCAGATTGTAACAATCTCAGGCCAATAAAAGTATTCAGGTGTCATGGCGACCGAGAGTTCTTCACAAAATTTATAGTGCCAATATCGCACCAACCACACCAGGGAAACATGTCCACAGATGACAGATTATGTACTGGTCCAAACTTCCAGATTTATGGATCAGAGGAGGTTTCTGAGCCGGGTATTGTTTCAATCGGTCGAGGATACTATGACATTATCAAGCATTCGGCGAACCGATATGCCAGTTACAGGAATCCATCAGTAGGTGACATAGATGACAGTGATAGAATCAGACGCCCAGACAGATCTCAAAATCAAACTTATGCTCTGTCATGGTTAGCAGATAAATGGGAGGTTTTTTAG

Transcript

Sda_chr09g02687.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR050167	Family	Serine/threonine-protein kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0043410	Biological Process	positive regulation of MAPK cascade	Interproscan
GO:1902103	Biological Process	negative regulation of metaphase/anaphase transition of meiotic cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-