| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_chr09g01429.1 | PRE-MRNA-SPLICING FACTOR RBM22 | Sda_Chr9 | 106744881 | 106816725 | - |
| CDS | |||||
| Sda_chr09g01429.1 | |||||
| Transcript |
| Sda_chr09g01429.1 |
| Protein |
| Sda_chr09g01429.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF21369 | STL11_N | STL11, N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR039171 | Family | Pre-mRNA-splicing factor Cwc2/Slt11 | Interproscan |
| IPR048995 | Domain | STL11/RBM22-like, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14089 | PRE-MRNA-SPLICING FACTOR RBM22 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000974 | Cellular Component | Prp19 complex | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0017070 | Molecular Function | U6 snRNA binding | Interproscan |
| GO:0036002 | Molecular Function | pre-mRNA binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0071006 | Cellular Component | U2-type catalytic step 1 spliceosome | Interproscan |
| GO:0071007 | Cellular Component | U2-type catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
