Detailed information of Sda_chr09g01345.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr09g01345.1THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATEDSda_Chr9100754668100787962+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF11635Med16_NMediator complex subunit 16, N-terminalRepeatInterproscan
PF20718Med16_bridgeMediator complex subunit 16, central helical bridgeDomainInterproscan
PF20719Med16_CMediator complex subunit 16, C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR021665DomainMediator complex, subunit Med16, N-terminalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR048338FamilyMediator complex, subunit Med16Interproscan
IPR048339DomainMediator complex subunit 16, C-terminalInterproscan
IPR048616DomainMediator of RNA polymerase II transcription subunit 16 , central helical bridgeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13224THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016592Cellular Componentmediator complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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