Detailed information of Sda_chr08g02993.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr08g02993.1WD40 REPEAT PROTEIN SWD2Sda_Chr8217140973217194295-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00080Sod_CuCopper/zinc superoxide dismutase (SODC)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001424DomainSuperoxide dismutase, copper/zinc binding domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036423Homologous_superfamilySuperoxide dismutase-like, copper/zinc binding domain superfamilyInterproscan
IPR037867FamilyCOMPASS component Swd2/WDR82Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR19861WD40 REPEAT PROTEIN SWD2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006801Biological Processsuperoxide metabolic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0048188Cellular ComponentSet1C/COMPASS complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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