Detailed information of Sda_chr07g00575.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr07g00575.1DNA LIGASESda_Chr74860268948632665-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan
PF10283zf-CCHHPBZ domainDomainInterproscan
PF14743DNA_ligase_OB_2DNA ligase OB-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001357DomainBRCT domainInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR016059Conserved_siteDNA ligase, ATP-dependent, conserved siteInterproscan
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR029319DomainDNA ligase, OB-like domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR050326FamilyNAD-dependent DNA ligase BInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47810DNA LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003909Molecular FunctionDNA ligase activityInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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