| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_chr05g01797.1 | 5'->3' EXORIBONUCLEASE | Sda_Chr5 | 141131294 | 141238865 | + |
| CDS | |||||
| Sda_chr05g01797.1 | |||||
| Transcript |
| Sda_chr05g01797.1 |
| Protein |
| Sda_chr05g01797.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03159 | XRN_N | XRN 5'-3' exonuclease N-terminus | Family | Interproscan |
| PF13513 | HEAT_EZ | HEAT-like repeat | Repeat | Interproscan |
| PF17846 | XRN_M | Xrn1 helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004859 | Domain | Xrn1, N-terminal | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR021133 | Repeat | HEAT, type 2 | Interproscan |
| IPR027073 | Family | 5'-3' exoribonuclease | Interproscan |
| IPR041412 | Domain | Xrn1, helical domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12341 | 5'->3' EXORIBONUCLEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0004527 | Molecular Function | exonuclease activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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