Gene detail

Detailed information of Sda_chr04g00463.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr04g00463.1	DYNACTIN 1-RELATED MICROTUBULE-BINDING	Sda_Chr4	37135217	37261921	-

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr04g00463.1

GATCACACGTTGGTAGGCGGACCTGATTCAGTTATCCCACAGGATATACAGTTGAACGGATTAGGGATCCTACCCGAGCACTGCTTGGTTGATATCGAGAACAATGAAGTCTTTATCACTCCTATAGAAAACTCAAGGACTTGTGTTAATGGATCAGTGATCACGCAGAAAACAAAAGTAAAACATGGCGACCGCATCCTCTGGGGATTCAACCACTTCTTCCGGATAAACTGTCCGAAAACAAACAGTCCACAAACTGCTGAGGCCGAAACATTCGATGGCGACCAAACAATCGACTTTGATTTCGCTCAACAGGAGTTAATGATGAAAGAATTGAGCAACAGCCCACTAGATGTCGCTATCCAAAGTCTCGAAAAACAATACGAAGACGATAAACAAGAAGCACTAGAATTACAGAGACAGATGTACGAGAAGCAGATGCAGAGTTTACGGAACCAATTAATGTCTCCGACCACGCCATCAGTTCCATTTCTCGGATTCGACCCCACACGCCTCACACCAACAGGAAACATGACACAGAGTGGCATACAGCGAAAATATCAAGAGTGGGCTCAAGAAAGGGACAAGGAGTTTAAGCAGAGCCTGGTCAAGCTTCGACAGGAGGTTCTCAAGGCCAACTCATTCGTACAGGAGGCGAACTTCCTCGCGAAGGAGATGGGAAAACAGACGGAATTCAGTGTCACTCTACAAATACCGGCATGCAACCTCAGCCCAAATCGAAGGAGAGGCGCCCTGGTGAGCGAGCCCGCGATTCTAGTAAATCGTAAGAAGCGCGGCAGTCAGGTTTGGACGATGGAGAAGTTCGAGAATAAAAGGATTGACATGAAGGAGATGTACGAGGAGAGAAAGGCGCTGGGACTGCCGTTACGGGTGGGGGCCGACTCTGACACTGATAGCTGTGATTCGTCGGACGAGGGCCCACCAAGAAAAGGCGATCCGTTCTACGAGTCACAGGAAAACCACAATCTTATAGGCGTGGCTAATATTTTCCTCGACTGTCTCTTCCACGATGTCAAACTGCATTATCATGTCCCAATCATCAGCCAACAAGGGGAGGTATCTGGGAAGCTGCATGTGACCATATCCAAATTAGGATCCGTCACCGACAGATTTGGTGACGCAAATTATTTTGAAGAAGATGACGACGATTTCATGGAACCAAGTTTTTCATCACCGACTCCTATTATTGTTAAGGTGTCTATCCATGAAGCGAGAGGGTTGCCTCCGGCACTATGCAATTTTGTCTTCTGTCAGTATTCATTTTGGGGAATCCCGGAGAACATTGTGGTGCCGCCTGAGATTCACCCAGATAGTGCCGCCCGCCGGAGATCAGATGGTGCTTCATTCGACTTCAATCACACAAAGGACTTCAAAGTCTACCTCACGGAGGAACTAATAGAACACATATCAGAAGGTGCTTTATCTATAGAAGTCTGGGGTCATCGAAGTCAAGGCTTCGGGTCAAACGGTGCCCCGCTAGATATGATGAAAATCAAATCGCGATCACTGCCAGACAGGTGGTCTGAGGTGATGAGGCGGCTAGAGATGTTAGTTGAAATTCAGGAACTTAACGACCAGGGAGACTATTCTCCAGTAGAGGTCATACCAAAACCTGAGGTGCCGTCGGCAGGAGTCTTTCAGTTACTACAGGGTCATTCAAGGAGATTAGTTGTGAAATTAAAACCATTATCCAAATCCGGAACGCTTCCGTTAATATGTGATTCCATATCGTCTCTGTCTATTGGTTGTCTATGCGTGCGTTCGAAGCTCCAGCGAGGGCTGGACAGTTATCAGGAGGAGGACCTTACACAGCTGCGTCATCACTGGCTCGAGGTGCTCAACAGGCGAAAAGATTACCTCGATGAACAGATACAGAAACTCATCAGTAGAACAGATAAATCTGACGCTGACGCGGACAGAGAGCGAGCTCTTATAGAGCAGTGGGCGTGTCTTACTGATGAGAGAGAGGCTCTGCACGCTCCACATCCTGGGAGCACTGTTCCTGGCTCGCCAGCTGATTGGGATGTCCCCCCTGATATGGAGGAGCATCGGCCAGTTATTTTTCTGGATCTGAATGCTGAAGACATGAGTACTCCTAACGCTAAAGAAGGGCTGCAGGCTGCTGGAATTAACTCGATATTACCGAAGGAACACAGCACGGAGTTTGTTAATCTTCCACTTCTCAAACAATTCACAGAAAAAGAAAATGTATGTGCTGTTGCGCCTTGGGATTCGTCTATCCACGATTCTCCGCATTTAAACCGAAACACTACTTCCAATGAGCGCGTTTATCTAATTCTCAAAGCCGTCGTCCGGTTGAGCCATCCAGCGTATATGGAGCTTGTGTTGCGGAAACGACTGTCCATAAATATTTATAAGAAAGGTTTATATTCTTACACGGACCGACTCAAAAAGAGGTTAACTAGAAGCGATATGTACTTCGGCAGTGGTGTAACTTATGATGTTGTTTCAAACATTCCAAAGGCCTCACGAGACTTAGAGGATATGGAGACGTTAGCTCAAATGGCGGCTTCTCATAATGACGCCCACACTCCAGATGGCGAAACGTACATTGAGAAGTACATCAAAGGCGTGTCAGCCGTCGAGAGTATTCTAACGCTGGACAGGTTACGACAAGAAGTTGCTGTGAAAGAACTGCTGGCTGCGTCGGGGAGATCACTAAAGAAAACTACAAGTGTTCCCAATATACATCAGGTCTGTCTATCAAACAGCATCAATTTCCGATCAGATAGTATCCAAGACTTATCGCTACAAGAACTAACATCTTCAAAATCAAGCAATGCCAGTTTTCCAGGGAATGCCAAATCACTATTAAGTCCGATGTCATCCTCGAAGATGATAATGAAATCGCTCCCGATGAAGACTGTTGTGGAGGAATCTACGAACCACCGAGAAACCAATCCGCTTCTTAAACAGGAGGAAATTGACGAACAGAATAAGAACCACGTAGAGAATGACCCACATAGCACAGGATCGGATGACTTTCAGGATTTTGAATCTTATGAAAGCCAGCAACTTGCATCTCAACACACAACTGATGTTAAGACAACAAACATTCCACATTCCTCAACAGCTGACAGTATTACTGAAATGCAGGTCAAGTCATTTACGCCAAGTATGACGTCATCTGGGTATGAATCTCAGGCTGTGTCAACGCTCACGCTTTCTTCGGAGGATTCAATGAGCACAAAAAGTATGGACGATACGGAGACAAAAGATAGTTCCAAACAAAATGGAAAGTTGAGGTCTTCTTCGGAGCATAGCTCCAGCGAGGAAGACTCGGAAAGTAAAAGCAGGCACGACTCTGTCGGCGATGATAATATTACTGTTGAGTCGAACAAATCGAAATCCGATTTGAAATTGCAGGCTGCTGTCATGGACCTTGAAATTTCTGAAGATAATTCTTCGACACCAATCAAACATAGTGCGAAATTTAACAACACAACAAGTTCAAGCAGTGGTCAAGGTCATTCATTTTTCGAGAGTTCGATGTCTTTTAATGAGAGTGCAATAGACCGAGATGGAGATTACGATCCTTACAGTGAAACAGCTATGGAGGAACTTGAGAAGCTCGCGGGCGATGAATCGTTTGATTTATCCGTTGACAATAACGAAACTGTAACAGAGAAAGCTTTGACTAGATCGTCAGAGTATTTAGGTGAAGGTAAAGTGGGTTACAAAGACAAGGTTGTGCGACGAGAACTATTGTTGGATCGAGAACGACCATCGTCGTGCATCATTTCCAATCCTATTGATCCGTCATTTGAAGGGCTTGATAGGATGGGACTGCATCATGCTTCTGATGAACTTCCTATAGAGGGTGATGATGCCATGAGCACGTGCTCTTTTGGTAGCCGAGCTGACCTTGACCGCTTAACAGACGGGCCTGTTCCTAGCTGGGTCAAGGCAGGCGAAAGTGTTATCGTTACCTCAACAAGAGGACCTTCCAAAACCGGCACAGTCCAGTTTGTTGGCAGTGTGGATTTTGCTGCAGGAACGTGGGTCGGTGTTGAACTAGATCTCCCAGAAGGAAAGAATGATGGAGCAGTTCACGGGGTCAGGTATTTTAAATGCCGAAATCGTCACGGCATCTTTGTACGGCCTGATAAACTGATATGGCACAAGTCAAGACGAACTACACGGAAAAGCAACGTCTCTCGTCGCACATCATTACCACTAAACGGAGTGAACACGAGCTCACCGCGAGGGTCTGGATTCATGTCTCCCACCACCGCCAGCAGTGCCAAACGGAGCAAGTGA

Transcript

Sda_chr04g00463.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan
PF01302	CAP_GLY	CAP-Gly domain	Domain	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan
PF12473	DUF3694	Kinesin protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR000938	Domain	CAP Gly-rich domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR022164	Domain	Kinesin-like	Interproscan
IPR036859	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18916	DYNACTIN 1-RELATED MICROTUBULE-BINDING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0031122	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0035371	Cellular Component	microtubule plus-end	Interproscan
GO:0051010	Molecular Function	microtubule plus-end binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-