Detailed information of Sda_chr01g02531.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr01g02531.1CRUMBS FAMILY MEMBERSda_Chr1189496572189552628+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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