Detailed information of Sda_Sca00805.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_Sca00805.1TRNA-PSEUDOURIDINE SYNTHASEptg000737l122957123850+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF09157TruB-C_2Pseudouridine synthase II TruB, C-terminalDomainInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR015240DomaintRNA pseudouridine synthase II, TruB, subfamily 1, C-terminalInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan
IPR036974Homologous_superfamilyPUA domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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