| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_Sca00269.1 | PSEUDOURIDYLATE SYNTHASE | ptg002504l | 18399 | 19909 | - |
| CDS | |||||
| Sda_Sca00269.1 | |||||
| Transcript |
| Sda_Sca00269.1 |
| Protein |
| Sda_Sca00269.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01416 | PseudoU_synth_1 | tRNA pseudouridine synthase | Domain | Interproscan |
| PF03706 | LPG_synthase_TM | Lysylphosphatidylglycerol synthase TM region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001406 | Family | Pseudouridine synthase I, TruA | Interproscan |
| IPR020094 | Homologous_superfamily | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal | Interproscan |
| IPR020095 | Homologous_superfamily | Pseudouridine synthase I, TruA, C-terminal | Interproscan |
| IPR020097 | Domain | Pseudouridine synthase I, TruA, alpha/beta domain | Interproscan |
| IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| IPR022791 | Family | Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11142 | PSEUDOURIDYLATE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0009451 | Biological Process | RNA modification | Interproscan |
| GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
| GO:0031119 | Biological Process | tRNA pseudouridine synthesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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