Gene detail

Detailed information of SQW42HX01_g7299 in Zoroaster sp. YZ-2022 Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SQW42HX01_g7299	BEN DOMAIN-CONTAINING PROTEIN 6	HiC_scaffold_2	60062794	60068375	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SQW42HX01_g7299

ATGGTGAAGAGGATAAGTAAGACTAATTGCGGTGACACCATGGGAAATTCTCAATTGAATAGTAATTAGTTCTGAAAAAAAAAACTGGAGGTTACAACTCGACGTTTCGATCAGTATGCTCTGATCGTCCTCAGGATAAATCATCTCCAAACCTTTTGACCCCATTTGATATCTATTTGTAACGGTGTGCTTTGTGTATTCATGGAAATAGCCAGCATTTTAATTTACAGAGTGGTGCAAATTTGATAGAAAAACATGAGTTAGGACAAACCAACCAGCCCAGCCCATAGCAACTTACAGTATTCCCGGGCTAACGGTTAATTCCAATGAAAGGTTATTTCGTATCCATCGCTGATTACAGTCATAATAGTTGGCCTGAACTAATAATAATAATAATGTGTGGACTTATATAGCGCACGTATCCACCAACTGAGTGGTGCTCAAGGCGCATTATATCATTACCCCTGCTCATAAGGCTCATAAATCATTCCTGAAACCATCTCAGCTCCCTGGGGAGTATACAGCTCAATTGCTGCCACTTACAGCGCATTATAGGGCTAATCAACAACTCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAAGGACCTCACCTTGATATCAGGCCGGACACTGAGATGCTGCTGCTGAAGTAAGAATAGTCAATAATGTGACCGAGATGACTCTATACCAAAAACCTGCTACTGACTGCCCATTAGCCAGGCATTGAACTTCACGTAGGCAATGGAGGTTCCTGATTTCTTTGACACGTCCCAAATTTCCACACCATGACACTTGAGTGCATGTATTTTTAAAACCATCAATCCATATGATTCCTCCTGTTTTGCAGCTGGACTATCCGGTTCGTTCCGGTTCTTGGTGTCACCTGCGGTGCGTTCCAGACTATCAAAGCTTGTTGATGACGAAGACCAAGGTAAATAAGGCCATGTTCCCACCCCCCCCCCCTCCCCCCTCCCTCTAACCTCCCTCCTCCCGGTTACACGCACGCAGACCTTGTTTTAATAATCCTTTACTCATTTAAAACGTATTTCATGTTCTCATTGGCTCGTAGCATTGAGAGCATCAGTCTCCATCCAATCATATAACTTGTCTCTTACATATTTTTACATATCAAACCCTTTTCCAGGTACGATGTTCTCATTGGCCAGTAGTGTTGAGAGTATAGGCCATCTGATTGGTCCACTCATTTTCAACTTGTTGTACAGTTTCACGACATACTACCATCAAGGATTAACCTTCCTGGTCATGGCGTCACTTTATGCTCCGATTTGTCTAATGACAGGGTAATTATTGTTTACATTATTAAAGAGAAATCTACATAGCCCTTTTAAAATTGTTGCTGTGTAAGTCTTTTTTTTTCTTTTCTTTTTCTCTCGAAAACTCGGATTGTTGGCTTAATTCCAAATGATTATACACTCTCTCGTACAGCTATTATCAATGGAAAGGTTGGACATCTAAGAGAAACAGCACAGAGGACTTGCAACCGGACAGAGAGAAACTCATCATGCCGTGATTCGATTTTGGCAGTCCCTTCATTTCTAAAGGTGTTTTTTTGATGGCCTCTCTTGGTGTGTGTTAACACAATATTGTGTGCTACGTACATGTTATGCATGTAGGTCTTTCAAAAGCTATATGTAAACAATCATTTTGTTCATACAATCATTTATTGTGTTATTTTTTAGACCAAGAAGAAAAGAAAGACAGTGAAAAACAGTGGCATGTCTGTGCAACAAGAAACGCTCAATATGGCAAGGGAACTGAGGCAACAGTTGGAGTCTACATCCAATAACATTGAGGTACAGTACATGCATGGCAGAGGATTGCTTAACAATTGTCTTCCTTCCCCCTTTTTTAATTTCTTTTTACCTGTTTCTTTACATTATTCAGCAGCATACAGTTGAATTTATGCGACTTCTTATAAGTAAAAAAAAAGTTGTCATAATTATATAACAAAGACCTCTTGCAAAGACAGTGAGTTTCAGTTTCAAGCATTTTTTCATAAATTAATCCCATTTTGACCAGCAACTGTGTAAAGGATAGAAAAGTCTTGTTACATTAAAATGGAGGTAAACATCTACAATGTAAGTTTCATAATTGCTAACATCTGATGTATACAGGAAGCTGCTGGGATATCCTCAGATGATGCTAACATCATTCAAAATCAGGCAGCTACCATTGCACGTCTTCAGCGCGAGTTGAACAAAGAGAGAGAGAGGAGAAACAGAGGATCAAGAACCAGTTGATGTTTCTTGAAGGTTAGTTTATGAATCTGAAAGTTGTTTTGACCTCATTGTTACCTTATTATGTATTTAGCGATAGATGATGTTCAGTGTGACCGCAGAATACAATATTACTTCTTCACTCAATCAGGTTATCCACAAATGATGTACATTGGCTTATACCATGTGTGCTCTTATAGTATAACGTGTGAAATAGTATCATGCCAAACTTTGAAATATAGTTTCCAAATTTATTGATGTTTTTATAATATTTATCAATTTAACAGGTGTTCCTGATTTCATAGTGGCCTTTAAGAACTTCATGACAGAAATGAAAGGAAATTGTCTCAAGGTAAGTTATACATGTTATTGTGAAATGTACACAAAACATTAAAACATTTATAACTGTTGCATTACATTTTCTCAACATCCATGGTCAACTTGGACATTTCATCACTTCAGTGTCCTCTGTATAAAATGTTATATTCAATTTATTTTCCACAGAGAAATGATAACTTATCTGCAGTGAAGGTGGCATCAGATGTGAGTGCAGTACAGGAAGCTCCTCCAACGGCAGTGGATCATGAAGATGAAGTAAGGAAATTGTTATTATAATTTGTTTTGATTTTACACTGCCATACCAAAGTTGTTGTTCCTTTAATATAAATGCCAATTTCTCGTGGATTCAAGCTATTGAAATAGAGTTGGATTATTTTTTGAAAGTTATAGGTTCTGCAACAGCTGTGTTCGTGCAAAATTAACTTCATGCATGATGTTGGGCATCGTCTTTGAATAATATGACTTGGGACATCATTCCTTGAACAGAATTATGTAAAATGAGCATAGAACCAGTACAAAATGTGATTGCACCACATTTTGTAACTAAAGTACATTGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTGCTTGAAAAACAAATATGCATAGTACTTGAAACAAATATGCATAGTATGAAAACAAATAATATGGTGTGAAAACAAATAATAATATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTAGCTTGAAAACAAATATGATAGTACTTGAAAACAAATATATAGTACTTGAAAACAAATATGTATAGTGAAAACAAATATGCATAGTGCTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGCATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATGTATAGTACTTGAAAACAAATATCAGGTAGAATTTGAGCATGTCACTTTATGGTTTGAGTAGAGCAGGTTGTACAATGTCATATTATTATAAACGCTTTTTTATTTCATTATTCCACAGGTATGTCTAAGCACCAGTGTCAGAGTAAGTAAAAAATTGCTGATGCGGTGCAACTCATCGGATCCACGGAAACTCACGTGTGAGCTGATGACATTGCTATTTGGGCGAGAGACTCTTGCATCCCACTCACTGACAGGAAGCAAGAACACAAAGGGCATCATGAAGCCAGCTTTGAACAAAGCCAAGGTGGATGCAATAATAGGTACATATATCAATTATTATCTCATGCATATAACTTTTATATAACCGAGTCATATGTAACATTAACAAAATTTGAAGGTGGCATTATTTGCAAAATGTTGTTCAGCAGCTGGTTTATTTAGCAATTTGTTCCTAACTTATAGACCACTCTGTATCTATGAAAGTAATGTAATATTTATTGCTGGACAGTTCACCAGTTAAATGAACAAAATCGTACTAAATTAGTAACTGTTTAGAAAATCCCTAAATTTTGTAATAAGCTTTACCATTGTTTGAAGGATTTGTTCTTGTAAAATTTTGTATACTCTTTTTTTATATTGTTAAAAAAATGCATTTTAATCACTTATGGAAGAATGGGTCTCAAAAATAGGCGTAGGGTTACGATTAACTGGATAACTTACGAGAGAGAATTTCAGTAAAATTCAAAGGTTACATGATTTATTATTCTTTTCACAGAATATGTTACACAAAAGTTCAAAGATGTCACCGTAGATAAAATCAAGACGGTGATGACAAACAAGCTTAGTAATGAAGGAAAACTTCAACAGAAGAGAGCTGCCCCCGACCAACCAGATCCCTGAATGGTGAAGAGGATAACTGGACTATCCGGTTCGTTCCGGTTCTTGGTGTCACCTGCGGTGCGTTCCAGACTATCAAAGCTTGTTGATGACGAAGACCAAGCTATTATCAATGGAAAGGTTGGACATCTAAGAGAAACAGCACAGAGGACTTGCAACCGGACAGAGAGAAACTCATCATGCCGTGATTCGATTTTGGCAGTCCCTTCATTTCTAAAGACCAAGAAGAAAAGAAAGACAGTGAAAAACAGTGGCATGTCTGTGCAACAAGAAACGCTCAATATGGCAAGGGAACTGAGGCAACAGTTGGAGTCTACATCCAATAACATTGAGGAAGCTGCTGGGATATCCTCAGATGATGCTAACATCATTCAAAATCAGGCAGCTACCATTGCACGTCTTCAGCGCGAGTTGAACAAAGAGAGAGAGAGGAGAAACAGAGGATCAAGAACCAGTGTTCCTGATTTCATAGTGGCCTTTAAGAACTTCATGACAGAAATGAAAGGAAATTGTCTCAAGAGAAATGATAACTTATCTGCAGTGAAGGTGGCATCAGATGTGAGTGCAGTACAGGAAGCTCCTCCAACGGCAGTGGATCATGAAGATGAAGTATGTCTAAGCACCAGTGTCAGAGTAAGTAAAAAATTGCTGATGCGGTGCAACTCATCGGATCCACGGAAACTCACGTGTGAGCTGATGACATTGCTATTTGGGCGAGAGACTCTTGCATCCCACTCACTGACAGGAAGCAAGAACACAAAGGGCATCATGAAGCCAGCTTTGAACAAAGCCAAGGTGGATGCAATAATAGAATATGTTACACAAAAGTTCAAAGATGTCACCGTAGATAAAATCAAGACGGTGATGACAAACAAGCTTAGTAATGAAGGAAAACTTCAACAGAAGAGAGCTGCCCCCGACCAACCAGATCCCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10523	BEN	BEN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018379	Domain	BEN domain	Interproscan
IPR037496	Family	BEN domain-containing protein 6-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35346	BEN DOMAIN-CONTAINING PROTEIN 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045666	Biological Process	positive regulation of neuron differentiation	Interproscan
GO:0045746	Biological Process	negative regulation of Notch signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-