Gene detail

Detailed information of SQW42HX01_g5870 in Zoroaster sp. YZ-2022 Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SQW42HX01_g5870	TIGHT JUNCTION PROTEIN	HiC_scaffold_2	23583504	23588517	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SQW42HX01_g5870

ATGGAGAAAGATAGTCGACAATCCACCGATTGTCTCTTAACAGAGAGACACCGGGTGTCGGCTGCCGTGAATGAGCCAGTGGAGACCGAAGACGTCTCAGCGGAAACAAATGTGTCTTTAGTGGAAAGACAAACACACGTCGATCTCTTTAAAAGTATCCCGAACACCCGAAATACACCATGTGAGTGATACACATTAGCATTTACTTTATCAAGTCATTATCTTAAAGTGTGGTGTATCGATTTTCAGAGTGGACGTGGGGGGGGGGGGCAAATTTGTCGGTAAATAATTTACCAACAAAAACAACAACTGAACCGACAATTCTTTTAATTTTTTACAGGCAATTATATGCATCTAGCATACAGAAATTGAATGAGGGGGTTGAAATCTCAAATATCAATTCCTAGAGTTTAACACTTTGAAAGTAGCTCGGCTCACTAACCCAAATCCCCACCCCCCCCCCAAAAAAAAAAAAAAAAAAAGAAAACCAAAACCTAAAGGAATTTCGAATTTCGTTTTGTGTTTTCATTCTGGTGCATAAAGTGGGCGCGGACAATTTTTAGAAACAAAAAAAAACAATGTAATAATGTTATATAATTGTCTGCTTTTGACTAGCAAATTGTTTTTGATGTCATTGTATGCCGTCACCCTGACATCAATATTGTGAACGGAGGCATGTACCCTCGTCCCCTGGGATCTCTGACCATGGTCACATCATCTATATCTTCCTTTTGTATTTATTTAAAAACATGAACAATAAAAATATACAAAACTACAAATTATTAAAAAGTCTATAAATAAAAACGACCATAAAACCATATCATGTTAGAGAGGAAAATTTAGGAAAAACAAACAAACAAGCCCGACAGACGGACAAACAAACAACCCAAACAAGCAAACAACAACAAACAGACAACCAACCAACCAACCAAACAAACAAACAAACAACTCAAGAAACATATAAACAAACAAGCAGCAAGCAACCAACAATCGAAGTTGCTTTATCGTTTTTGTACAGTGAGTCTTATGTACCTTGATGATGCGGCTCTTCGCAGTTTGGCATCTGAAATGGGCAGTGAATGGCGTAAACTAGCATCCTATCTTGGCATTAACAGTTATGCAGTTGAAAGGCTAGTCGCAGATAACAAATCGACAGAAGAAAGCGCGTTTAAAATGCTTGTGACATGGAGACAGAGATCAATCGAAGGAGGAAACACTACCGGTACCCCTGTACATCTGCAGAATGCTTTAATGAATGCTGAACGCTGTGATCTTGCGGAAAATCTTGAAGGTAAGCAAAGGAACTATTTCGTAATACACCGTAAACAATTTCCCATAAAATATACGGTATAAAGTAGTGCAGCGGGTTGCCAGCGTTTTACCGTTTTTTAGGTTTTTTTTACGGTTTAAACCGTAAATTGATTAACGTCTTACCGTAATTTTACGGTAAAAAGGCTGTAAATATTTCCATATTTATTACGGGTACCGTATTTTCATAACTGGAAACGAATCTACATTTAACGTATTATTTACGGTATTTAAGCAGTTAAGGTTGAAACGTCCAAGGAATGCTGCATCTACTATGAGATGGATCTGCAGATATTGGGGTTAATCAATGCCATTGTACACGATGTCTTTCACTTACCTACACGTACGCATAGTCTCCAGTTAACATATAGAACATTCTCCTGAGGACGATCAGAGCATACTGATCGAAACGTCGAGTTGTACCCCCAGTTCTTTTCAGAACTAATTACTACTCAATTGAGATTCCACATGGTGTCACCGCAATTAGTCTTACTTATCATCCTCACCATGCAAAGCTACAAGTTTTACCTATATAGAACATGTATCCTTTTGTCTTTTCAAATCTCTTTTTAGTCACGGTGGCATGCAATTATAATCTATATTTCAATATTTTAAATTTTGAATGTACTTTACATCAATGTAGAAGAGAACATCAAAATCTTACCTTTTTATCATAAAATTAACAGGAAATATTTGAAAATGGCCTAAAATTACCCATTTTCACATATTTAAACCTTGGAAATGTTTCGAGCACAAAGCTAGGTCAAATTAAGGTCAGATTATTTACATAATTGGATATATCCCAGATTGCAATGGGAGCGGTCGTAATACGGGTTTCGGCCGTAAAACACTGAGAACACTGACTGACAGAGAAAGGGATGATTACGGTAATTCACCGTAGAATTTACACACTTTTCGCCGTAAAATTACGGTAATGTTTTACACCGAAGGTGTACATAGGCCACGGCCGGGCAGATTGTTGTGCAGCTTGATTGAAAGAGAATAAGCATACTATTACAGTACTGATTTAAACGCATTTTTACCAACATTACCAGTGTTGTACCTACCCTTTTAAACTAGAGATTACACGATATGAAGTGAACCATTAATTTTATACATTGGTTTTTTTTTTTTAGTTTGTTAAGTAATGACCTCCGTTATAATGCCTTTAATTATCTTCATGTTCCACATGTGATAGAACGCTTACGACAGAATGGAAGAGCTGGCGAATGTCCCCATTCTCACAGAACCAAGACGCGGGTTGAGCGCCACGTACCTAAAGAAAATACTCTCCGTGCATCGCTTGATGAGTTCCATCATTTCACCAAGGATCTGGAGAATTCTGACCGTCTTGGCAAGACAATGCGCTTGCCAAACTTTGAAGCTGATCATTTGGACTATAATGGCGGGGTTTTGGATATTCCAAAGTACAACGTCCATCTGTATATCCCGCAAGGGGCCATTCCGTCAGGCATGGTCCAGGAAATTTATGTACACGTTGGTCAAGCCACAGTACAAGATGTGCCCTCGTTACCGACATCGAAGACAATCCTCGCCCCGCTCGTCAAATTCGGCCCCCCGGGATTGAAGTTCACGAGAAGCGTGATTCTGCACTTTCCGTGTTTCGCAATCGAAGGCGGTCCAAACTGGAGTAAAGCAGTTGACCAATATTGTTCTGATGATTACCACCAGTTGCAAAAACATGACTGGGGTCACCTTGGCGCAGATAAAAACAGTAATGTCATCATCAAAGACAAACAGGTCATCATGATACTTGACAAGTTTTGCAAGCACTCTTTGGACGGGATACCTGCAATTGATCACTGTGACAAGACACTAAAGGCTTGTGCAACGGCTCCCGTGTTTAACTCGAGTGATGGGTGTTTTCAGTTCCATGTAGTGATTTGGAACGCTAACAAGGTGAACTTAAAGGGGTAATATCGTCACGATCAGAGCACTTTCAACAGGGCATGGAATCGGTGCCCTAGTTTGAGATGAACACAGTGACTCAAAATTACTGGCTCATTTATGCAGCAGCAACGGTAACATGACCTTATCATCATATAGGGTATTGTGGTAGTCACTGAGTTAGGGAAGAGGGCCAAAGTCATGGTACAGCCCAAGCCTTTGAGAAGCCCGGCCAGGTCTGGGCTACCTAGGCTCGATTTCACAAAGCACTAAGATTCATCTTAAGATGAGTTGGTAGTATTACCATAGTGATTTGTATTGTGACATCACACTTTGCTAAGCAATTAAGATTGATACACAGTTAAGATCAATCTTAGCTCTTTGTGAAATCGGCCCCTGGCCTCCTAATCTGTCTTTTGTGAGTCCTAAATCCTGTAACAATACAGTACCTGTCAATCAACCTAACCTGGGCTTCCGAAGGGCCTAGCCAAGTAGAGCTCATTATAATGGCTGCAGTTGTGAACAAAAGACAGCCGAGGTGTCAGTCAAGTCTATGTTAACAATAAGAGCTATTTGAGATCTATTCATTAGTAAAGGGTCTTTTGTGCTCAGCGAGGGGATTATATAGGCCCATAGGCCAGGGCAAAGCCAGGGCCTGGCCAGGCTTCTCAAAGGCTTGGCTGTACCATGACTTTGGCCCTCCTCCCTTAATCTAAAACTAGTGTTCTGATTCCATGCCCTGTTGATCATATACTGCCTCTTTAAAGAGGGACGTAACAATTTGCTTACTGCGATTAGTTTAAATAAATTTACATAAAATATTCATATTGCTGGAGGTTTATGAATAATTCAGTAGTTGCCGAGTGCGTCTCGACAAAGGCTGCAGTTTCGCGCGCTTCGTCTACATACAGTTATCCAATTTTTTTTCGATTGTCAAAATGAAAAAGGAAACAAAAAAGTCGAAAATTCATTACAAAATTTAATATTTATGACAACAAAGTAAACGATATGCTATAATAACCTAGCGACAAGCTGCTACATTTGTGAAGGGCGCCACCAACATATCTTGTACGGAGCGAAGTGATGGATATCACCGCCGACTTATCTACTTATCTAGTACAAGTGCAAACTCATTATTGTCCCTTATGGGGGAAAAAATCATGACACATGTGGTGAAATGAGGGCGCTGTTCATTTCAGCCTACAACTGAACCAGTTCAGCTATAGACAATTTGATGATTATTGTAATTTTGAACAAATAGGGCTACTTTTAAATTACAAACTTGTACAGTAGGTATGCTGATATTCGTATTTATATTCGAAAGCACGAATTTCAATAGGAAATTGTATTCAGAATCGTATCTGAATTTGGTACCGTTTGATGTAGCTGATATGAACCACTATTTTGCAACTATAATAAAACGGGTACGTTTATACAGTGTTTACAAATAAAGCATTATTATTATTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATAATGCAGTCTATTTTATCATTTTTCCCGCTTTATTTTATTCGAAGGATATAATTGGAAGCGACTCTTCTGTGGGGCGTCTTGGAGCTCGGACTGCAGCTGAAGACATTGAAGTGAGCTGGGACAGGGGCGATTTGGAGCTACACTTGAAAAATCTTCTTCCAGGTGTCAAGGCTGTATCAGGAAATGGAGTGGTATTACCCCAACCCTAAATGGAGAAAGATAGTCGACAATCCACCGATTGTCTCTTAACAGAGAGACACCGGGTGTCGGCTGCCGTGAATGAGCCAGTGGAGACCGAAGACGTCTCAGCGGAAACAAATGTGTCTTTAGTGGAAAGACAAACACACGTCGATCTCTTTAAAAGTATCCCGAACACCCGAAATACACCATTGAGTCTTATGTACCTTGATGATGCGGCTCTTCGCAGTTTGGCATCTGAAATGGGCAGTGAATGGCGTAAACTAGCATCCTATCTTGGCATTAACAGTTATGCAGTTGAAAGGCTAGTCGCAGATAACAAATCGACAGAAGAAAGCGCGTTTAAAATGCTTGTGACATGGAGACAGAGATCAATCGAAGGAGGAAACACTACCGGTACCCCTGTACATCTGCAGAATGCTTTAATGAATGCTGAACGCTGTGATCTTGCGGAAAATCTTGAAGAACGCTTACGACAGAATGGAAGAGCTGGCGAATGTCCCCATTCTCACAGAACCAAGACGCGGGTTGAGCGCCACGTACCTAAAGAAAATACTCTCCGTGCATCGCTTGATGAGTTCCATCATTTCACCAAGGATCTGGAGAATTCTGACCGTCTTGGCAAGACAATGCGCTTGCCAAACTTTGAAGCTGATCATTTGGACTATAATGGCGGGGTTTTGGATATTCCAAAGTACAACGTCCATCTGTATATCCCGCAAGGGGCCATTCCGTCAGGCATGGTCCAGGAAATTTATGTACACGTTGGTCAAGCCACAGTACAAGATGTGCCCTCGTTACCGACATCGAAGACAATCCTCGCCCCGCTCGTCAAATTCGGCCCCCCGGGATTGAAGTTCACGAGAAGCGTGATTCTGCACTTTCCGTGTTTCGCAATCGAAGGCGGTCCAAACTGGAGTAAAGCAGTTGACCAATATTGTTCTGATGATTACCACCAGTTGCAAAAACATGACTGGGGTCACCTTGGCGCAGATAAAAACAGTAATGTCATCATCAAAGACAAACAGGTCATCATGATACTTGACAAGTTTTGCAAGCACTCTTTGGACGGGATACCTGCAATTGATCACTGTGACAAGACACTAAAGGCTTGTGCAACGGCTCCCGTGTTTAACTCGAGTGATGGGTGTTTTCAGTTCCATGTAGTGATTTGGAACGCTAACAAGGATATAATTGGAAGCGACTCTTCTGTGGGGCGTCTTGGAGCTCGGACTGCAGCTGAAGACATTGAAGTGAGCTGGGACAGGGGCGATTTGGAGCTACACTTGAAAAATCTTCTTCCAGGTGTCAAGGCTGTATCAGGAAATGGAGTGGTATTACCCCAACCCTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF00791	ZU5	ZU5 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR000906	Domain	ZU5 domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13865	TIGHT JUNCTION PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005923	Cellular Component	bicellular tight junction	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0045216	Biological Process	cell-cell junction organization	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0150105	Biological Process	protein localization to cell-cell junction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-