| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g37111 | TUBULIN | HiC_scaffold_22 | 1565270 | 1601663 | + |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00091 | Tubulin | Tubulin/FtsZ family, GTPase domain | Domain | Interproscan |
| PF00233 | PDEase_I | 3'5'-cyclic nucleotide phosphodiesterase | Domain | Interproscan |
| PF01590 | GAF | GAF domain | Domain | Interproscan |
| PF03953 | Tubulin_C | Tubulin C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000217 | Family | Tubulin | Interproscan |
| IPR002073 | Domain | 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | Interproscan |
| IPR002452 | Family | Alpha tubulin | Interproscan |
| IPR003008 | Domain | Tubulin/FtsZ, GTPase domain | Interproscan |
| IPR003018 | Domain | GAF domain | Interproscan |
| IPR003607 | Domain | HD/PDEase domain | Interproscan |
| IPR008280 | Homologous_superfamily | Tubulin/FtsZ, C-terminal | Interproscan |
| IPR017975 | Conserved_site | Tubulin, conserved site | Interproscan |
| IPR018316 | Domain | Tubulin/FtsZ, 2-layer sandwich domain | Interproscan |
| IPR023123 | Homologous_superfamily | Tubulin, C-terminal | Interproscan |
| IPR023174 | Conserved_site | 3'5'-cyclic nucleotide phosphodiesterase, conserved site | Interproscan |
| IPR029016 | Homologous_superfamily | GAF-like domain superfamily | Interproscan |
| IPR036525 | Homologous_superfamily | Tubulin/FtsZ, GTPase domain superfamily | Interproscan |
| IPR036971 | Homologous_superfamily | 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamily | Interproscan |
| IPR037103 | Homologous_superfamily | Tubulin/FtsZ-like, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11588 | TUBULIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000226 | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0000278 | Biological Process | mitotic cell cycle | Interproscan |
| GO:0004114 | Molecular Function | 3',5'-cyclic-nucleotide phosphodiesterase activity | Interproscan |
| GO:0005200 | Molecular Function | structural constituent of cytoskeleton | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005874 | Cellular Component | microtubule | Interproscan |
| GO:0007017 | Biological Process | microtubule-based process | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0008081 | Molecular Function | phosphoric diester hydrolase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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