Detailed information of SQW42HX01_g32532 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g32532SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINHiC_scaffold_1860669266404688+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF02187GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF17902SH3_10SH3 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR003108DomainGAR domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR036534Homologous_superfamilyGAR domain superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR041615DomainDesmoplakin, SH3 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP