Detailed information of SQW42HX01_g29022 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g29022LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDHiC_scaffold_151856026718593567+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000001DomainKringleInterproscan
IPR001190DomainSRCR domainInterproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR018056Conserved_siteKringle, conserved siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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