| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g10807 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED | HiC_scaffold_4 | 15702533 | 15712245 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF14608 | zf-CCCH_2 | RNA-binding, Nab2-type zinc finger | Domain | Interproscan |
| PF18345 | zf_CCCH_4 | Zinc finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR045348 | Family | CPSF complex subunit CPSF4-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23102 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0098789 | Biological Process | obsolete pre-mRNA cleavage required for polyadenylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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