Detailed information of SKAU_T00406230 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00406230TENASCINCM056396.12380968323849956-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF18720EGF_TenascinTenascin EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR041161DomainTenascin, EGF-like domainInterproscan
IPR050991FamilyExtracellular Matrix Regulatory ProteinsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46708TENASCINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030155Biological Processregulation of cell adhesionInterproscan
GO:0031175Biological Processneuron projection developmentInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP