Gene detail

Detailed information of SKAU_T00395910 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00395910	SIDEROFLEXIN	CM056395.1	28864978	28899957	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00395910

GCAAAGATAAGCAGGGAAGTGTAGTCATGCAGTTGGCTAATACCTACACCCGTCTTATAACgaaattatgaaaacaaactaCGTCTCCTGTCGACATCCAATTGATTAACTGCTCGAGTAGTTTTGCGTTTAAGTTTTGAGGGTACTCCGTTCCTGTGAAATTGTGCTATACTTCTCTTAGCTGAGTATTTACCCGTATTCATTTTACTATCTGGTGTCATGGCGGAATCAACAGTCTATCCTCAGTTTCAGCTGGGGAAATCTCGATTCGACCAGAACACGTTCTCCGGCCGACTGAGGCACTTCCTGGAGGTGATCGACCCCCGCACGCTTTTAGTGTCTGAGATTCGTCTAAAGGAGTGTGTGAAACTGCTCGATGATTTTAAGCAAGGGAACCTTCTACCTGGAGTGTCAAATGCACAACTTTGGGAAGCTCAGAAAATCAAACAGGCCGTCATCCACCCCGACACTGGCGAGAAGATCCTCATGCCCTTTCGCATGTCAGGTTACGTCCCATTTGGAACACCAGTAGTCGTGGGCCTACTCCTTCCTAATCAAACCCTGGGGTCCACAGTCTTCTGGCAGTGGCTGAACCAGAGTCACAACGCCTGTGTTAACTACTCCAACCGGAACGCCACAAAGcctgcCCCAGCTTCCAGGTTCCTCCTGGGATATCTGGGTGCCGTTACCAGCGCCGTTTCTATTGCGGTGGGGCTCAATGTTCTGATCCAGAAAGCCAACAAGTTCAGTCCGGCAACCCGAGTTCTGGTGCAGAGGTTCGTTCCTTTCCCGGCTGTGGCCAGCGCTAACGTCTGTAACGTCGTCCTCATGAGGAACTCTGAGCTGACGGAGGGTATCGACGTGCTGGACACCGACGGCAACGTGGTGGGAACGTCCAGAGTAGCTGCCAAGCATGCACTGCTAGAGACGGCCCTGACCCGAGTGGTCCTGCCCATGCCTATCCTCGTGCTCCCACCCATGGTCATGGCCTTCCTGGAGAGgCTCCCCCTGCTGCAGACACAAAGGAGGCTGGTCCTGCCCGTGCACAGCCTGGTGTGTTTGGGGGCGTTCGGCCTGGCCCTCCCCCTGGCCATCAGCCTGTTCCCCCAGATGTCTCAGatcGAAGTGTCACAACTGGAGCCAGAAATCGCCATGGCAACGAATGACAAGGTGGTGACCTACAACAAGGGGCTGTAACTACCGTAGACGTCAAAGGCAAGCGCACGACTCCAGTCCAAAAGACAGCTGAGCCGGTCCAGGTCTTACCAGGAAGCAACCGATAGCCTTAAAACCCTTGTGTACAGTGCGATTATTATCAGAAAGGACCTGACGCTTGGGGCTAAAGTGACTCACTCTCATGAGCTCgttccctcagccaatcacaggtCCCCACattccctcagccaatcacagatccCCACATtttctcagccaatcacagatccCCACATTTTCTCAGCCAATCACAGGTCCCCCACGTtcccacagccaatcacagatccccatgttccctcagccaatcacagatcgCCACGTTtcctcagccaatcacagatccccacgttccctcagccaatcacaggtCCCCCACGTtcccacagccaatcacagatccccacattccctcagccaatcacagatccCTACACCCTCTGAACTGCATGTTAATATGCATTTCTTCAATTGGACTGTCTATTCAACCAGCTTAGTTTAATACCTCGGGCTATAACCTGCCAATCCCATTTCATTTGCTCTGATGGATCCCCCAGTACATGTCTGTTAGCATTAATTCAGTCTTAACTAGCCCGTAAcaccaggccggccagcggaggatgggctccccctctatagccaggATCCTCTccagatttcttcccatttttccattctgtttcagtgtttttcttcccactgggaagTTTTATGCTTTTGGGGGGTTCAGGTCTGATTTTTGGGGGTTCGggcctggtttttgggggttcgggcctggtttttgcccagctTTCTGTTCCTCTAAAGTGTTGTTGTGACAatatctttgtaaaaaaaaaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03820	SFXNs	Sideroflexins	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004686	Family	Tricarboxylate/iron carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11153	SIDEROFLEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006811	Biological Process	monoatomic ion transport	Interproscan
GO:0015075	Molecular Function	monoatomic ion transmembrane transporter activity	Interproscan
GO:0015137	Molecular Function	citrate transmembrane transporter activity	Interproscan
GO:0015746	Biological Process	citrate transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0031305	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:1990542	Biological Process	mitochondrial transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-