Detailed information of SKAU_T00389930 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00389930BEIGE/BEACH-RELATEDCM056395.11001729110285977-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF06469DUF1088Neurobeachin-like, DUF1088DomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF14844PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan
PF15787DUF4704Neurobeachin/BDCP, DUF4704 alpha solenoid regionRepeatInterproscan
PF20425NeurobeachinNeurobeachin alpha solenoid regionRepeatInterproscan
PF20426NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000409DomainBEACH domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR010508DomainNeurobeachin-like, DUF1088Interproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR023362DomainPH-BEACH domainInterproscan
IPR031570DomainNeurobeachin/BDCP, DUF4704Interproscan
IPR035835DomainSH3 domain-containing protein 19, SH3 domain 3Interproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR046851DomainNeurobeachin, beta-propeller domainInterproscan
IPR046852DomainNeurobeachin, alpha-solenoid regionInterproscan
IPR050865FamilyBEACH Domain-ContainingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13743BEIGE/BEACH-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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