Detailed information of SKAU_T00381480 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00381480E3 UBIQUITIN-PROTEIN LIGASE TRIMCM056394.11586470715873337+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017903DomainCOS domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR033492DomainTripartite motif-containing protein 54, B-box-type 2 zinc fingerInterproscan
IPR050143FamilyTripartite motif-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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