Gene detail

Detailed information of SKAU_T00376910 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00376910	GLUCAGON-FAMILY NEUROPEPTIDE	CM056394.1	3474718	3481511	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00376910

ATGACAAGTGACTGCCTCGCCCGTATCGCATCCGGCACTCATCACTATCTAACTAACAATAGAATGACGATGTCTAGTAAACCGACGTTAGCGTTGTTCATCTATGGAATTATAATGCACAGCGCCTACTGTTCCCCGGTTGGGCTCGATTATCCTAGACTTAGCATGCGTTTTAACGTTGGTGTATTAAAACTTGAAAACGAGGTTTTTGACGAGGACGGAGACACGTTTACGGACTTGGATTTTGATGGAGATCAAATTGCTATAAGAAGCTCCCCTTCGCTGTTTGACAACGTGTACACATTATACTACCCACCAGAGAAGAGATCTGAAAGACACGCAGATGGAATCTTTAATGAAGCCCGCGGGGACGGGCTTGGCCAGTTTCTTCATTCTGTGGTGGCAGAGCGTGCAGGTGGAGAGGGTGTTAAGGAAGATGACACAAAACCCTTATCCAAAAGGCATTCTGACGGAATCTTCACAGACAGCTACAGCCGTTACCGAAAACAAATGGCTGTGAAAAAGTATCTAGCAGCGGTACTGGGGAGAAGGTACAGGCAGAGAATTAAAAACAAAGGCCGCCGTTTCTCCTTTTTGTAGCGTCAACAATCCAAACAGCACGTCTGTCCGGCCCTATAGATCAAATCATTCTGAGCAGTGGATCGCGCCTGTGTTCTTTAAACATGTATTTATGTATGAAGTAAAgccattaaaatgaatattttaataatattattgtttttcctttgtacaaaaaaaagcaCTTGAGACCGCACACATATACTTTGTGGACCAATCTTGTAGGTAGCCTAATTATATGGCTATGTAtgtaacattaaaaaaatgaggaaaaaaaaaatcgtacAGCTTTAACGTTATTCGCCTAAGatatcattttacatttttacacgtATACAAGACACGTATAGATTGCAGAAAAGACAATCAAAGCATTTATTCCCTTAGCCAAACTTAGCGTATTCCCTTTCACAGCCTTCCACATGGAACCTTTAATTCAGTCCACTGCTGCCAGGTATAGTGAGAGATTATGTGCCTGTTGGGCTTTAGTCAGTTCCGAAGCTGACTTTTTCCTTCTCTACTAACCTCAGCCTCAACCTTGGACCCTCGGTTCCATACTTCAGTTTTGTTCAAAAACAAAGAACAGTATACTTAAACGCGTACGTCTACCTGGCTGGGCATGCAATTTGTCTAAGGCACGAGGAAGCCTCTTTATTGAATTATCTGATCAGCCTGCGCGTGGCCTTGCTATAGCTACTCCAGAGTAGCCTACTCCGCGAAGGCGCGCGACTGCGGTGGATATCCGTAGACCAATTATGCGCAATTAGCCTTCCAGTGCCACCCCATGGGGCAGATTCGGCTGTTAGAAAAAGTTCGGAAAGCACGAATGTCTctcttttgtttgtttctcttaccttttctctcactctctctatcatTTATTCTACACGGAAAGTATGATAAGCACGTTCCTCTAACGAATGTTAGAGTTGTAGACCCAGGCGGAAACTGCGGATGTGTAAATAGGATAAACGCCAGTGTGTGTGAGAACATTATGTCGATGAGAACGACCCCATACCCTTATTATACCAGTCTTTAAGAGTCCAGTCTGTAAGCTCTGCAATGCTGCGCCTTCTTTCACACAATGTATCCCTGTGTAAACGCTATCCCTTATTAATGGGCTGTTTCTGTCTTGTTCAGGtcacccactgccccccccccccccccccttggttTTTGTGTTCTGATACtgtgttcattcatttatttactttaaaaatataGATTTCGTTGCTAGGCACTTTAATTTAATGCCAAATGTGAACTAGCCCTCCTGTCTGTGTGAATTCAAATAGGCTTGATAAACATTTCTAATAGGTGGGATGGATTTGTTAATTTTCACAATGTAGTAATGTAGTCTCCATAACATATTATCGGTCAGGTGGGTccattgagagggagagagaaagagtgaaagagtcaCCCATGTtttatagagggagagagagtcacCCATCCATGTTTTATAGAGGGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00123	Hormone_2	Peptide hormone	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000532	Domain	Glucagon/GIP/secretin/VIP	Interproscan
IPR046963	Family	VIP/GHRH-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11213	GLUCAGON-FAMILY NEUROPEPTIDE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005179	Molecular Function	hormone activity	Interproscan
GO:0005184	Molecular Function	neuropeptide hormone activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007218	Biological Process	neuropeptide signaling pathway	Interproscan
GO:0016521	Molecular Function	pituitary adenylate cyclase activating polypeptide activity	Interproscan
GO:0031175	Biological Process	neuron projection development	Interproscan
GO:0032880	Biological Process	regulation of protein localization	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0043204	Cellular Component	perikaryon	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan
GO:0045860	Biological Process	positive regulation of protein kinase activity	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0051428	Molecular Function	peptide hormone receptor binding	Interproscan
GO:0070374	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-