Gene detail

Detailed information of SKAU_T00376100 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00376100	APOLIPOPROTEIN A-II	CM056394.1	1252576	1258846	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04711	ApoA-II	Apolipoprotein A-II (ApoA-II)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006801	Family	Apolipoprotein A-II (ApoA-II)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11027	APOLIPOPROTEIN A-II	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan
GO:0008035	Molecular Function	high-density lipoprotein particle binding	Interproscan
GO:0008203	Biological Process	cholesterol metabolic process	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0015485	Molecular Function	cholesterol binding	Interproscan
GO:0030301	Biological Process	cholesterol transport	Interproscan
GO:0031210	Molecular Function	phosphatidylcholine binding	Interproscan
GO:0034190	Molecular Function	apolipoprotein receptor binding	Interproscan
GO:0034361	Cellular Component	very-low-density lipoprotein particle	Interproscan
GO:0034366	Cellular Component	spherical high-density lipoprotein particle	Interproscan
GO:0034370	Biological Process	triglyceride-rich lipoprotein particle remodeling	Interproscan
GO:0034374	Biological Process	low-density lipoprotein particle remodeling	Interproscan
GO:0034375	Biological Process	high-density lipoprotein particle remodeling	Interproscan
GO:0034380	Biological Process	high-density lipoprotein particle assembly	Interproscan
GO:0042157	Biological Process	lipoprotein metabolic process	Interproscan
GO:0042627	Cellular Component	chylomicron	Interproscan
GO:0042632	Biological Process	cholesterol homeostasis	Interproscan
GO:0055102	Molecular Function	lipase inhibitor activity	Interproscan
GO:0060192	Biological Process	negative regulation of lipase activity	Interproscan
GO:0070653	Molecular Function	high-density lipoprotein particle receptor binding	Interproscan
GO:0072562	Cellular Component	blood microparticle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-