| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00373190 | TRANSCRIPTIONAL REGULATOR ATRX | CM056393.1 | 22238721 | 22300528 | + |
| CDS | |||||
| SKAU_T00373190 | |||||
| Transcript |
| SKAU_T00373190 |
| Protein |
| SKAU_T00373190 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF17981 | ADD_ATRX | Cysteine Rich ADD domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000330 | Domain | SNF2, N-terminal | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR025766 | Domain | ADD domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| IPR041430 | Domain | ATRX, ADD domain | Interproscan |
| IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
| IPR052131 | Family | ATRX domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46357 | TRANSCRIPTIONAL REGULATOR ATRX | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005721 | Cellular Component | pericentric heterochromatin | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0031297 | Biological Process | replication fork processing | Interproscan |
| GO:0031490 | Molecular Function | chromatin DNA binding | Interproscan |
| GO:0035064 | Molecular Function | methylated histone binding | Interproscan |
| GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
| GO:1901582 | Biological Process | obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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