Detailed information of SKAU_T00340170 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00340170CHONDROLECTIN VARIANT CHODLFDELTAE.CM056390.12687880526881481-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001304DomainC-type lectin-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051505FamilyC-type lectin domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14789CHONDROLECTIN VARIANT CHODLFDELTAE.Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0050840Molecular Functionextracellular matrix bindingInterproscan
GO:1990430Molecular Functionextracellular matrix protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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