Detailed information of SKAU_T00301800 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00301800UNCHARACTERIZEDCM056387.13324349533307939+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF20173ZnF_RZ-typeRZ type zinc finger domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031248FamilyE3 ubiquitin-protein ligase RNF213Interproscan
IPR046439DomainZinc finger, RZ-typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22605UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002040Biological Processsprouting angiogenesisInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:2000051Biological Processnegative regulation of non-canonical Wnt signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP