Gene detail

Detailed information of SKAU_T00290690 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00290690	CYTOKINE RECEPTOR	CM056387.1	8583824	8600576	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00290690

aaaaaacattagaagaGACTCACAGCGTTCAAGGTTCAAGATTAAAGAGTGTGATTTTATGGGATTTACTTTAATAACAATTAACACACGAACAAAACATCGCGGAAGttTAAAGGACAACGACATCGTTCAAATCACGAAGATAATATATCCTGCTGTAAATATGCCATCTATAATTCTCGTGTTTTTCATCGAATTTGTTTCACTGATATGGTGTGtacatTTGGACGTTCCAGAACTGAATTGCTTTGACGACTATGTAACGACAATGATTTGCGACTTCACCTTTGACAAGCTTCTCAACTGCAGTGGATATAGCTTAGACTTTGAATCACCAATTCAAGAGCATTACAGATGCACTTTAATAAACTCTGAAGAATATGCAAATTCTTATCGGTCCAAATGTGGATGCACGGTTGAGATGCCAGAGTTTGTAAACAATGAGAAATACACAGTACGTCTGATGGAAGGACGGAAAGTCGTAAATTCAACAATTATCACTGCAACGAACAACATCAAGCCCAAAGCGCCTGAAATATTACTGGTGATGCTAATGGAAAACGGGAATTACAACGTGACATGGAACACAAATTACCCTGAAGATAATGCCCTTTCTGACTTTTTAGAGATTCAGCTGAGCTACAATAAGAAAGGAGAACCAGACAAGACTTCGAGGATTGTCAGCGCATCTCTGCCCTTTCATGAAATACCGGGCAGCGATTTGGAGCCAAGCTGCGAATACGTTGTGAAGGCGAGATCGTACTCCAGCCGTTACAAGACCCGGTTCAGTGACTGGAGCCGAGCGGTGGAGTGGACTCACCCTGCCTCTGTCGGGAACGTGTCGAAAGCCATCATCCCCGTCCTTTGTGTGCTTCTCATCATCAACATCTGTGCTTTCTATTGGTGCTGCACTCGACTCAAGGAGAAGTGGTGGGATAAAATTCCTACCCCCAATAATGACATAAAAGACATGCTTCcagtaaatgctgagGTTTTTATCCTTAAAAATGACGATCCGTCCTCCTACCATCCTGCCCTCCTGACAGTTGTTGGAACTGAGGAAAAGTCATGGACTAAAGTGGATCAGTGGATATCAGAATGTGAGCAAGATGCTGAATATAAAAATGTCTCCAGCCGTGTGTCGGCAAAGGACAGCGGTGTCTACTCGTGTGGCGGCAGTCAGAAAAGGTTAAGTGGCTCTGTAGGTTCCTGTGGCTCCTCCGAATCGGGTTACAAAAACGTCCTGTACACCAGGCAGTCGACTAGCCCTTTACACAGCACCAGTTCTCATGAGCTGCTTAGTGGGAGTAGCGGGCCCCCCTCCTTTCCGACTCAGCCCACACCACGCTCTGACTCTGACTCCTGCCACGTCTACAGTGAAGTTCAGTTTCAGAAGACCCCCGGTCCAGGCCCCCCGACGACCCTTCGGTCCCCTGATTTGTTCACGAAAGCTCCCAGGATCGCCACAGACTTCGAGTACCGTGTGACCGGTGCTCCTCCGGTAGAGCGAGCCGGTCCGAAGTGCCCCTTCAGCGTGGACGGCCCGGACGCCGCGTTACTTCTGAAAACCTGTGCGAACGCCATCAGAGTCGACGATGGATACGAGAGCTTCGGCGAGGCAATCGCCAGAGCTGTTCCGGGACGGGCTactttcccagcatgcactctGGGACCCTGTGAGGAAGGCTACCAAGCTCTCGAGACCGTGGTAAAAAACAGAGCAGACTGGCACTCTGATGCAGGCGAAGCAGATAGGGAGGCCTCTTCAATAGAGGGTCCAGAGAAGAGCACTGGGCAGAACTGGGAGCTCTCACAAGACTTCATCACCAGTGCCTCCCCATTGATGCAGAAAAGCAGTGTGGAAAGCTCCTCTAATTCTGCTTTGACAGCATCTCCCATTATTCAAATTTACACAGATAGTTCCTACCATAGTGTGTAGTGTGCACAATGTCCCTTACTGCTATTGCACACCGTCACTGTAAACTCTCTGATTAGCTGTTATCATCAGGACTGTAAAACATGAACATGCTTCTGTGATGAGGACTCACCCACTGAATAGATAAAGGACTGATAAGAGTATGAGAACTTTTATGCTACATGTGTACAGACAACGGAGGTTGGAAATGCAATCCAACATTGGTAACCGTGTTTAAATGTGATGCTTATTTCAAACTCAGGTGAGAACACTAATGAAAATAGGTTTGACTTATATAgtgaaatatttattgtagcaCTGCTGATTTTTATGTTTGTTAAGTGTCagcgttaaaaataattatttgttccCCTGGGGAAAAAAATCTTAACATCAAAAAGTATTTAAATCTTAACATTCAAGTAAAACTTGAATATTCTTGATCAGTATCATTCAGTTTCATTTACTTTTAAAAAACCGTATCAAAATCAtcttgattgaaaaatgattttgAATTGCAGACTGGAGGATTACAGATTCTGTATCATTTTTATGcacataaaaacaataaaatagatAAAAATTTAAAACCACTTCCTTGGACAGTATTCAACATTCCAAACTTCTGAATCACATACAGCTCCAGCATATCTTTTGAATAACCTATTCCAGCTCTGTTCAAATAAGGATTCATTCaaatataggcctattttatTTTCCTTACGTGCCAAATTCTGTTTTTCAGTCTACTCCCTGTATATTTTGTCCATTGTCCTTTTCATCAGTAAATTTCtttttgcaattaaaaaaaatagtttttgtttgttttccaatGCAAAAGAGTTCACAATGAACTCTTCAGACGGCTCATTTTAACTTCACTACCAAGGTGATGTAGATTAATGGTCGGAACTTATGTAATATGCTTagctttgcattaaaaaaaaaaaaaagttgtaacttttatttttctcctGTTAAAAATGCAGTCAGTTTCACATTATAACATCAAATTGCATTGCACGTGACCGATGTAATTCATGTTATGCTGATTTGCAGTAAGACCAACATAAAACCAAATTTCAGTTGGTGCTTTTAAATACAGTCAAACTTAAATTTTTCAAGCAAACATTTTTTGCAAATCATGTTGCAATTATCAGGAAATTACTTCTAATTAACATCATAAATAGTTAATGCGTGCTTAAATTTTTAAATATGTAGGTAGCCTGAAAATATTATATGTAGTATGTTATTTGTGATGGCCTTTGTTTTATTGCTCCTGGTTTGTTTTCATGTGGTCATCCATCTTGTGTTACAGCAGTATGACAACCACATAGGCCTATTGTTTgaggtgggaaaaaaaaaaaaaaaacagaaaacaagtcAGGGTGGTTTGTTTACTGGTGTTGGCATTTCTGATGCTTCCACTTCCTCATACCAGGAGTCACGCTATTGCTACTTTGTGTGCACATATACAATCTGTTATTGACTGTTATTGACGTTTATGTTGTGAGAAGCCAGATGAGCCTCTGTAAGAGAGCGTCTggcaaataattaaataaatgcacCTTCTGCGAAACTTTTGTGAAATTTTCAGAAGCCCTGTGATAGcagataaaaccattttcagATGCAGAAGGTAGAAGCAGATATGAGATTGAATGACTTGCTTTGTTGTGCAATTTTCCCCTTTGGTTCAGTGGTCATGTATTGTTAGTGAATAGTTTGGGATCTGTTTTCATGCTTTTACTGCGGCACTTCAATCTGCATTAAATGTtacaatttttcatttttacgatgttttttcttttcttgtgctGTAAAACTGTATTTTTCTCCAACATGTCCAGGGACTAAACTAAACTGCAGTTGGACTAAACTAGCCAGTTGGTTAATACTGGCGCATTTACAATAATGTTGATTCATTGATTGATGAGCATTGTCCCCGTAAGTAAAAATGAATgtaacatatatgcacacacagcagaagtgttggtgtaaatgtaacactgctggtgttaAATGTGCTCCACCATTCTTGATGTGCAGTGACAAAGCCCCAACTAGGTTTTATAGGTACAATACATTGGGATTCAATGTGCTCCACTAATTTCAGTAGAACCCTAGAGAGTATTGCATACATCTTCATAATTATTGGCatccttggtaaagatgagcaaaaaaggctatgaaaaaatgtatttgttgtttATCGGCTTGATCTTACACTCACAATATGAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09238	IL4Ra_N	Interleukin-4 receptor alpha chain, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015319	Domain	Interleukin-4 receptor alpha, N-terminal	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23037	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002532	Biological Process	production of molecular mediator involved in inflammatory response	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-