Gene detail

Detailed information of SKAU_T00264800 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00264800	MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL	CM056385.1	14059601	14085147	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00264800

TTCCCCATTTTTATGATTTGTGTCTTTCCATGCATTTTCTGTATGTACAAATTAAAGTGTGCATGTGCACCTTTGACTCAAAtccatattttttgttgttgtcaaaaAAAGGTGTCAGGCAGAAGTCTACAGTGCAGTTTGCAACACGCCCAGACCAGCCAAAGCTGGCCTATCGGAAGGTGAAGGGAAAGAGCCCAGGCGTTGTCTTCCTCCCAGGCTTTGCCTCCAACATGggtgggcagaaagcagaggcaCTAGAGGAGTTCTGCAGGTCTTTAGGCCACTCCTACCTGAGgTTTGATTACACAGGCTGTGGGGCATCGGAAGGTGTCTGGGCAGAATGCACAGTCGGAAGCTGGAAAAGAGATGTTCTGTTTGTGTTGGATGAACTTGTGGATGGTCCACAGATCCtggttggctccagtatgggTGGCTGGCTCATGCTCCTGGCAGCCATCGCCCGTCCAGAGAAGATTGCAGCCCTGGTTGGCATCTCCACTGCAGCCGATCATTTTGTTACAGCCTTCAAGTCACTTCCTCTAGAGGCGAGGAAGGAGTTTGAGGAGAAAGGGGAGTGGAGTGTTGCCACCAAACTCAGCGAGGAAGGCTCCTACACGCTCAGCATGAACTTTCTGCAGGAGGCCGAGAACCACTGCGTCCTGCAGTGCCCGATCCCAGTGACCTGCCCGGTGCGCCTCATCCACGGGCTGAAGGACCTGGACATCCCCTGGCACATCTCCATGCAGGTCGCAGAACGCGTGCTGAGCACGGATGTGGACGTCATCTTGCGCAAGCACGCGCAGCATCGCATGGCTGAGAAGGATGACATCAAACTGATTGTCTACACCATCGATGACCTCATAGACAAACTGACCACCTCGAGTGAAACGGACGGAAAGCACCGACTCTACACAGGCCCAATCTACAAAATCTTATCGTTGTTCCATATTTGGAGAGCAGTAGTACTGAGTGGACAGTTGATACTGAGCAACACAGCAGTGATGGCCAACAGGGGACCCAGCTATGGACTGAGTCGGGAGGTGCAGGAGAAGATAGAACAGAAGTACGACCACGAACTGGAAGCCAGGCTGGTGGACTGGATGATTGCGCAGTGTGGGGGAAACGTGGAGAGGCCGCAGTCAGGCAAACACAACTTCCAGAGCTGGCTAATGGACGGAACActtcTCTGCAGACTCATTAACAGCCTGTACCCACGTGGCAAGGAGCCAATCAAGAAGATCCCAGAGACACAGATGGCATTCAGGCAGATGGAGAAGATTTCCCAGTTCCTGAAGGCAGCCGAGGTCTATGGGGTGATCACCACTGACATCTTTCAGACCGTTGACTTGTGGGAAGGAAAGGACATGGCTGCCGTACAGAGAACCTTGATGGCTCTAGGGAGTGTGGCCATCACAAAGGATGATGGGTACTACCGTGGCGACCGTGATTGGTTCCACAGGAAAGCTCAAGGACATCGGCGTGAGTTTTCCGAGGAGCAGCTTCGTCAGGGCCAGAGTCTGATCAGCCTGCAGATGGGCAGCAACCGTGGGGCATCTCAGTCAGGCATGACGGGCTATGGCATGCCCCGCCAAATCATGTAAAACTGTTCCCCGAGACCTCTTAGGCTCATTCCTAAATATACCTGTGTTCCCCTGAACCCCTGATAGTACCACGTACCCCTGATACTCCCACTGTATATCCCAATGTCCCCTCAGTATTACTGTTACAACacaggggccattctgtcacacAGTATTACAGCACTGTCACAAAATGGCGACAGGCTTGGCAGGAAtataaaacatacacacacttaatttattatttataattaagTATTTATGAATTACTAATTATTCTGaatatatttattaaattgtTAGTCTTGttaattcatgtatttatttgtttggaTTTTCTGGCCCTTGTTATTTTTTGATCTGTTTATCATGTGCAATACAAAATTTGGCTCAAAGCGATGACCTGTAGGTTTCTTTCAGATGTTTGTGGTCATGAAGTGGTACAAATGCAGAACAATTAGAATTTGCATTTGAAATCTCAAATACAGTGGCCTAGATGGAGATGCAGTTGTAGAGGCAATACTGTATTTCTACactacataaaattatgtttctaATTCATCCTGTATGTTAGTAAtcttattttaaatattaatttccctaaaacatatattgtatatttagtTGTTAATGTATTGCATGTTTAAAAGAGGGTTATTGGTTCTGATGTGGCGGTTTTAGTTTTGTATATACATAGTATTTTTGTTTCAGTATATTTAATTGTGTCTGAACTTTAAATGGCATGTTAAATGGAGCAATATATTTGCATAGGTCTGGCAGCTTGTTTGTCGAGAGAGGTTATTAAAAAATGACAAATACACTTCATCTGCTCAGTTACCCATAGCATCCTCTCCTCATGATGACGCAATGCTTAAACGTAGGGATAAAAAGCCTTTTAAGTACTCTCAACCCCTTAAATATCAGGGTTAAGGTGAACAAATAATGCCTTTAGCATTAATTTCAGTGCCACAGTGCTTGTGTTATGGGTGTAGAGATTGGAGGTGGCGTACCCTTAAAGGGCGGATCATATTGAAATGTTATTTTCAGCTTGATGCTGTGTTCTAAACTGCAGCATGAAAGAAGGCAGTGGATAGGTTTATCTGTGCCATTAATGTTACACCATAGAATATTTCAAATGTTAAAAACCAGGCCAAAAGTCTGTAtattatattttgttatattcaGATGACAACTGTTAGTTTTGATTGTTTTTTGCTTTCTTTAATATGTAAAACACGACTTAATACTTTTGTGCCTTCTTTTACTGGATGCAATTTGTgaatacaaaaagaaaatacaataatctttactttaaaaatgtttatttaagcaGTTATGTCCTCCTTCTCCACTCACTAACCTGTATGACTGAAATATATGTGAGTGAATGAAATAGACAGCATCAGGACTTTGTTTTCCTTCAATGCCATGacatttataatatttatatattcagAAGCTGTATATCTATCATTATAATTcatactttttttgttttcattcttgTAAGTAGGTTTCCTTATATTAGTGAATGTATGCTCTCACACATCCCCTAATTAAAAGGTATTTCAAATGCTACTGTAAGGCTCTTTACAATTAGGATTTTTGGCTCCCATTTATATGAATTTTGATGATGTCAATCGTTTGCAAATTTCACATCTTGACCTGTCGGTCTCATAATTCATTGTAATTATTTAACATAGTATTGCTGCATCTTGAATACCCAGTAGAttgagtgtatttattttttcagatgGTTTTTCCCTGAGTGACCATTGGTTATATGAACATAAGAAAACAATAGTTGGTTGTTACCCTCCCAGTCAGTTTGGCAATGGCATTCACTTGCGGGATCTGTTTTTAATCAGTATTGTGTAATCTGGTTTTATTCCAAAACTGTGACTCAATTTGTTTTgattcttttcatttattttaattttaaaccaAAATggaatatggatgtaaacatgcATTTAAAGACACAATCCCATCACATACAACAAAATACTTTTTGAAGGTTCACAGATGAATATTCTTGGTATTTTCATTTCCAGTGCACTACAAAATGATTTGATTTCCTTTTGATTCTATGACTTGTGGAGCTGAGGGGGCGGGATGGCATTAAACGTGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF00402	Calponin	Calponin family repeat	Repeat	Interproscan
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000073	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR000557	Repeat	Calponin repeat	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR003096	Family	Smooth muscle protein/calponin	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR052382	Family	Mitochondrial ABHD10 acyl-protein thioesterase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16138	MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002084	Biological Process	protein depalmitoylation	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008474	Molecular Function	palmitoyl-(protein) hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-