Gene detail

Detailed information of SKAU_T00184730 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00184730	FER-1-LIKE	CM056381.1	7863692	7883729	-

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00184730

ATGGTGCTTGCCAATGGGACGTCCCACTCTCGAACCCTGTCTCGCCCCACAGGAGACATAGTGGTTAATATGGAGCCGGACGCCGGCGTTAAGAAGATGGAGACGGTAGTCAAGCTGGACGCTAGTTCTGACGCTGTCGTTAAAGTCGATGTGAACGAAGAAgagaaggagaaaaagaaaaagaagaagaagaagaaaggagAGGAGGTAGAGGAGGACGAGTACGATGAGAGCATGCTGGACTGGTGGTCCAAATACTTCGCCTCTATTGAGACTCTAATGGAGATGCTGCGGGCGCAGGAAGCAGCGCAGGTGGAAGCGGAGGAGAAGGAGGATCTGGAGATCGCGGCAGAGAGCgcagagaTCAAACCTGATGACTCTCCTATGAAAGGCTCTAAGGGCAAGGACAGGGCCAAGGACAAAGTCAAAGGCTTCAAGGACAAGAAGAAAGGTCAGGCTGCAGACGGGTCTGAGAAGAAGCTGAGCAGGCCCAAAGTCGACGAGCTCCTGGTGTACAACAAGGAGCTGGAACACGATTACGGAAACTTCGAAGACTGGCTCCACACCTTCAATCTGTTCCGAGGGAAGGTCGGCGACGACGACGACCAGAGTGTGGCGGACGACGATCGGATCGTCGGCAGGTTCAAGGGGTCCCTGTGTATGTACAAGCTCCCCCTTTCCGACGAAATCTCCCGTGAGGTGGGAATCGACCCCAACATGGGCATGTTCCAGGGCATTCCGCACAACGACCCCATCAACGTCCTGGTCCGTGTGTACGTCGTCAGGGCGACGGATCTCCACCCTGCTGACATCAACGGAAAGGCCGATCCTTACGTCTGCATCAAACTGGGCAAGTCCGAAATCAAGGACAAGGAAAACTACATCTCCAAACAGCTCAATCCCGTCTTTGGGAAGTCCTTCGACATCGAAGCCACGTTCCCCATGGAGTCCATGCTCACGGTATCCGTGTACGACTGGGATCTGGTGGGCACCGATGACCTCATCGGCGAGACCAAGGTCGACCTGGAGAACCGCTACTACAGCAAGCACAGAGCCACCTGTGGCATCTCCTCCCACTACGCTGCCTATGGTTACAACCAATGGCGGGACCCCATGAAGCCGACGCAGATCCTGGCCAAGCTCTGCAAGGAGGGCAAACAGGACGGCCCCCACTACGGCCCCGGGGGGCGCGTTAAGGTCGCCAACCGCGTCTTCCTGGGGCCCACCGAGATCGAAGACGAGAACGGTCTGAAGAAGCAGACGGACGAGCACCTGGCCCTGACGGTGCTGAGGCACTGGGAGGAGATGCCCCGCGTGGGCTGCAAACTCATCCCCGAGCACGTGGAGACCAGGCCTCTCCTCAACCCAGACAAGCCTGGCATCGAACAGGGCAGGATTGAGATGTGGGTGGATATGTTTCCCATGGACATGCCAGCCCCAGGCCCCGCCATCGACATCGCCCCCAGGAAACCAAAGAGTTATGAGCTCCGTGTTATAATTTGGAACACTGATGAAGTAGTTCTTGAAGACGATGCTTTCATGACAGGAGAGAAGATGTCTGACATCTATGTCAGGGGTTGGCTGAAGGGTCAGCAGGAAGACAAGCAGGACACGGACGTGCACTACCACTCGCTCACTGGGGAGGGAAACTTCAACTGGCGTTTCGTTTTCCCGTTTGACTACCTGGTCGCTGAGGAGAAAATCGTCATCTCCAAGAAGGAGTCCTTGTTCTCCTGGGACGAAACCGAGTACAAGATACCCGCCCGACTCACCATGCAAGTGTGGGACGCCGACCATTTCTCAGCCGACGACTTCCTGGGTGCAATGGAGCTGGACCTGAACCGGTTCCACCGTGGAGCCAAGACGGCGAAGCAGTGCTCCATCGACATGGTCGCAAACGACCAGGACCTTCCCACCGTCTCCATTTTCAAGCAGAAGAGGGTGAAGGGCTGGTGGCCGTTTGTGGCCCGGGACGAGAACGACGAGATGGAGCTCACGGGAAAAGTGGAGGCGGAGCTACACCTCATGACAGTGGATGAGGCGGAGAAGAATCCCGTCGGCTTGGGACGCAACGAGCCCGACCCCCTGGAGAAACCAAACCGTCCGGACACCAGCTTTATCTGGTTCATGAACCCCCTGAAGTCCATCCGATACTTCATCTGGCACAACTATCGCTGGCTGATCCTCAAAATCCTAGTTGTGGCCCTCGTCCTTCTACTACTGGGTCTGTTTCTTTACTCCGTCCCCGGGTACCTGGTCAAGAAGCTTCTGGGAGCCTGA

Transcript

SKAU_T00184730

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF16165	Ferlin_C	Ferlin C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR032362	Domain	Ferlin, C-terminal domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR037721	Family	Ferlin family	Interproscan
IPR037724	Domain	Ferlin, fifth C2 domain	Interproscan
IPR037725	Domain	Ferlin, sixth C2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12546	FER-1-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007009	Biological Process	plasma membrane organization	Interproscan
GO:0016082	Biological Process	synaptic vesicle priming	Interproscan
GO:0030672	Cellular Component	synaptic vesicle membrane	Interproscan
GO:0035612	Molecular Function	AP-2 adaptor complex binding	Interproscan
GO:0048787	Cellular Component	presynaptic active zone membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-