| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00180230 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE | CM056380.1 | 110522765 | 110567287 | + |
| CDS | |||||
| SKAU_T00180230 | |||||
| Transcript |
| SKAU_T00180230 |
| Protein |
| SKAU_T00180230 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00233 | PDEase_I | 3'5'-cyclic nucleotide phosphodiesterase | Domain | Interproscan |
| PF01590 | GAF | GAF domain | Domain | Interproscan |
| PF03736 | EPTP | EPTP domain | Repeat | Interproscan |
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000483 | Domain | Cysteine-rich flanking region, C-terminal | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR002073 | Domain | 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | Interproscan |
| IPR003018 | Domain | GAF domain | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR003607 | Domain | HD/PDEase domain | Interproscan |
| IPR005492 | Repeat | Leucine-rich glioma-inactivated , EPTP repeat | Interproscan |
| IPR009039 | Repeat | EAR | Interproscan |
| IPR011044 | Homologous_superfamily | Quinoprotein amine dehydrogenase, beta chain-like | Interproscan |
| IPR023088 | Family | 3'5'-cyclic nucleotide phosphodiesterase | Interproscan |
| IPR023174 | Conserved_site | 3'5'-cyclic nucleotide phosphodiesterase, conserved site | Interproscan |
| IPR029016 | Homologous_superfamily | GAF-like domain superfamily | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR036971 | Homologous_superfamily | 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11347 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004114 | Molecular Function | 3',5'-cyclic-nucleotide phosphodiesterase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0007601 | Biological Process | visual perception | Interproscan |
| GO:0008081 | Molecular Function | phosphoric diester hydrolase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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