Detailed information of SKAU_T00175800 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00175800EXTRACELLULAR MATRIX PROTEIN 2-RELATEDCM056380.19468780394710974-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001007DomainVWFC domainInterproscan
IPR001300DomainPeptidase C2, calpain, catalytic domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR043184FamilyExtracellular matrix protein 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46544EXTRACELLULAR MATRIX PROTEIN 2-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004198Molecular Functioncalcium-dependent cysteine-type endopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0010811Biological Processpositive regulation of cell-substrate adhesionInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0070052Molecular Functioncollagen V bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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